Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177835.1_202017-04- 25] 11,496 sequences; 12,629,710 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq2928 2100 0.0 >seq2928 Length=1541 Score = 2100 bits (2328), Expect = 0.0 Identities = 1196/1224 (98%), Gaps = 8/1224 (1%) Strand=Plus/Minus Query 8973 TAAGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCGTTGTA 9032 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1380 TAGGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCGTTGTA 1321 Query 9033 GAAAGAAGCTCACGGAACGGACCCACGACGATGCAGCGGCAGATCGGTTTTGCGGAAGCG 9092 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1320 GAAAGAAGCTCACGGAACGGACCCACGACGATGCAGCGGCAGATCGGTTTTGCGGAAGCG 1261 Query 9093 GAAAGTGCGGGCAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGGAGAAG 9152 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1260 GAAAGTGCGGGCAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGNNNNNNNNN 1201 Query 9153 GTCGTCCCT--------TGGTCGCGGCTGCTGTCGGTGATCGGGCCGTATTACCCGAAGG 9204 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1200 NNNNNNNNNNNNNNNNNTGGTCGCGGCTGCTGTCGGTGATCGGGCCGTATTACCCGAAGG 1141 Query 9205 GCGAGCGTGGCCGGCCGCCGATTGGCCTGGAACGGATGCTGCGGATCTACTTGCTGCAGC 9264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1140 GCGAGCGTGGCCGGCCGCCGATTGGCCTGGAACGGATGCTGCGGATCTACTTGCTGCAGC 1081 Query 9265 AGTGGTACGGGTTGTCGGACGAAGGGCTTGAAGATGCGCTCTACGACAGCATCGCGATGC 9324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1080 AGTGGTACGGGTTGTCGGACGAAGGGCTTGAAGATGCGCTCTACGACAGCATCGCGATGC 1021 Query 9325 GCGCCTTCGCGGGCATCGACCTGGCGCGCGAGAACGTGCCGGACGCCACCACGCTGTTGA 9384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1020 GCGCCTTCGCGGGCATCGACCTGGCGCGCGAGAACGTGCCGGACGCCACCACGCTGTTGA 961 Query 9385 AATTCCGGCGCCTGCTGGTCGAGCACGCACTGACGCGAAAGCTGTTCGACGAGATCGGCA 9444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 960 AATTCCGGCGCCTGCTGGTCGAGCACGCACTGACGCGAAAGCTGTTCGACGAGATCGGCA 901 Query 9445 TCGAGTTGTGCGAGCGCGGGCTGATGATGAAGGAAGGCACGCTGGTGGATGCGACGATCT 9504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 900 TCGAGTTGTGCGAGCGCGGGCTGATGATGAAGGAAGGCACGCTGGTGGATGCGACGATCT 841 Query 9505 TCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGAGCCGTGACCCGGAGATGCATCAGA 9564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 TCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGAGCCGTGACCCGGAGATGCATCAGA 781 Query 9565 CGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCCATGTCGGCGTCGACGCCGACT 9624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 780 CGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCCATGTCGGCGTCGACGCCGACT 721 Query 9625 CGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACGAGCCGGACGTATCGCAGGCCC 9684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 720 CGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACGAGCCGGACGTATCGCAGGCCC 661 Query 9685 ACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCGATGCGGGCTACACCGGCGTGG 9744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 ACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCGATGCGGGCTACACCGGCGTGG 601 Query 9745 ACAAGCGCGAGGAGATGAAGGGCAAGACGGTGAAGTGGCACGTGGCGCTCAAGCGCGGAA 9804 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 ACAAGCGCGAGGAGATGAAGGGCAAGACGGTGAAGTGGCACGTGGCGCTCAAGCGCGGAA 541 Query 9805 AGATCAGGGCGATGCAGGAAGGTCCGCTGAAGGACCTCGTGATCGCGGTCGAGCGAACCA 9864 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 AGATCAGGGCGATGCAGGAAGGTCCGCTGAAGGACCTCGTGATCGCGGTCGAGCGAACCA 481 Query 9865 AGGCGCAGATCCGCGCCCGGGTCGAGCATCCGTTTCATGTCGTGAAGAACCTGTTTCGTC 9924 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 AGGCGCAGATCCGCGCCCGGGTCGAGCATCCGTTTCATGTCGTGAAGAACCTGTTTCGTC 421 Query 9925 ATCGCAAGGTGCGCTACAAGGGTCTAGCCAGGAACACGGCACAGCTGTTCAGTCTGTTCG 9984 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 ATCGCAAGGTGCGCTACAAGGGTCTAGCCAGGAACACGGCACAGCTGTTCAGTCTGTTCG 361 Query 9985 CGCTGGCGAACCTGGTGATCGCGAAAAATCAGCTGTTGTCGACTCATGGGAGCAATCCGT 10044 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 CGCTGGCGAACCTGGTGATCGCGAAAAATCAGCTGTTGTCGACTCATGGGAGCAATCCGT 301 Query 10045 CATGTGTGTGAAAAACGCGGGAAGTGAGGCCCGAATACGAGCGAAACTCACCTCGCATGT 10104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 CATGTGTGTGAAAAACGCGGGAAGTGAGGCCCGAATACGAGCGAAACTCACCTCGCATGT 241 Query 10105 CGTCAAATTCCTACGTCAATCTGAAAATTGCAACCTGCCTCGTCCGTTATGCGGACGACA 10164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 CGTCAAATTCCTACGTCAATCTGAAAATTGCAACCTGCCTCGTCCGTTATGCGGACGACA 181 Query 10165 GGCTCATTGATCAGCGTTTCCCTA 10188 ||||||||||||||||||||| || Sbjct 180 GGCTCATTGATCAGCGTTTCCTTA 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119017350128096