Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177835.1_202017-04-
25] 11,496 sequences; 12,629,710 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq7489 145 2e-29
seq95 138 2e-27
seq342 136 8e-27
seq10263 125 1e-23
seq3708 122 2e-22
seq6472 89.7 1e-12
>seq7489
Length=15256
Score = 145 bits (160), Expect = 2e-29
Identities = 167/225 (74%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||| ||||||||||| | | || || ||||||||||| | || || ||| |
Sbjct 317 GTTCAATGATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGT 376
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || ||||||| |||| | || |||||||| |||||||||||||| ||||| ||||
Sbjct 377 TGTAGTCAGATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 436
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| |||||||| || ||||| || ||||| || || || ||||| || | || |
Sbjct 437 GGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAG 496
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 192523
| ||||| ||||| | ||| ||||| |||||||| || || ||||
Sbjct 497 AAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAA 541
>seq95
Length=15350
Score = 138 bits (152), Expect = 2e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || || |||| ||||| || || ||| || || || ||
Sbjct 8673 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 8614
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| |||| |||||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct 8613 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8554
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || ||||| || || || ||||| |||| || || ||||| ||
Sbjct 8553 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 8494
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||| || ||||| || ||||| ||||| || || | || || ||||| ||
Sbjct 8493 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8443
>seq342
Length=506
Score = 136 bits (150), Expect = 8e-27
Identities = 164/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||| ||||||||||| | | || ||||| || ||||| | ||||| || |
Sbjct 284 GTTCAATGATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGT 343
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || ||||| || |||| | || |||||||| |||||||||||||| ||||| ||||
Sbjct 344 TGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTT 403
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| |||||||| || ||||| || ||||| || || || ||||| || | || |
Sbjct 404 GGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAG 463
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
| ||||| ||||| | ||| ||||| |||||||| || || ||
Sbjct 464 AAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTT 506
>seq10263
Length=10618
Score = 125 bits (138), Expect = 1e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 192333 ATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTG 192392
||| || |||| |||||| || ||||||||||| | |||| | || |||| |||
Sbjct 10323 ATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTG 10382
Query 192393 TTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTT 192452
||||| |||||||| ||||| |||||||| || || || ||||| || ||||| |||||
Sbjct 10383 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 10442
Query 192453 ATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 192512
| |||| || || |||| || || ||||| || ||||| || || || || || ||
Sbjct 10443 ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGT 10502
Query 192513 TAATGTTTTAATAAATATCTGCAT 192536
|| ||||| | || || |||||
Sbjct 10503 TAGAGTTTTGACGAAAATTTGCAT 10526
Score = 113 bits (124), Expect = 9e-20
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || || | || | ||||| || || ||| || || |||
Sbjct 10130 ATACCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 10189
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || |||| |||| || | ||| ||||||||||| || |||||||||||||| ||
Sbjct 10190 GACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGA 10249
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||||||||| |||||| |||| || || |||| || || |||||
Sbjct 10250 GGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 10309
Query 192487 AC 192488
||
Sbjct 10310 AC 10311
>seq3708
Length=282
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || || || || | ||||| || || ||| || || |||
Sbjct 10 ATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 69
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || |||| | || || | || ||||| |||||||| || ||||||||||| ||
Sbjct 70 GACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGA 129
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || || || ||||| || || ||| || | || || |||||
Sbjct 130 GGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCA 189
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| |||| ||| ||||||||||| || || || |||| ||| ||||||||
Sbjct 190 ACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 239
>seq6472
Length=7312
Score = 89.7 bits (98), Expect = 1e-12
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 49821 AAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880
|| |||||||| || || || ||||| ||||| ||| | || ||||| || ||| |||
Sbjct 450 AAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTT 509
Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940
|| || ||||| | ||||||||||| | ||| || || || ||||| || || ||
Sbjct 510 AAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAA 569
Query 49941 AATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCT 50000
|| | ||| || | | ||||| || | || |||| | ||||||| | | | |||
Sbjct 570 AAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCT 629
Query 50001 AATATCCAATTTATAGCCCAATCTGCTTT 50029
||||| ||| |||||| || || ||
Sbjct 630 TGAATCCATCTTAAAGCCCATTCGGCCTT 658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984334993479600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |