Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177835.1_202017-04- 25] 11,496 sequences; 12,629,710 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3708 170 2e-37 seq95 150 2e-31 seq10263 129 5e-25 seq342 109 5e-19 seq7489 104 2e-17 seq2206 86.0 6e-12 >seq3708 Length=282 Score = 170 bits (188), Expect = 2e-37 Identities = 176/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| |||| || | ||||||||||| || || | || || ||| || || Sbjct 239 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 180 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | ||| ||||| ||||| ||||| || ||||| ||||| Sbjct 179 GACACGATCGATAACGTTAAGTCGAAA-ATCCAGGACAAGGAAGGTATCCCTCCAGATCA 121 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||||||||| || ||||| || || |||| | |||| || || || Sbjct 120 ACAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 61 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||||||||| || || |||||||||||| ||||| | || || Sbjct 60 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 13 >seq95 Length=15350 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || | || || |||||||||| |||||||| || ||||| ||| | | Sbjct 8445 GATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTC 8504 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| ||||| || || || || || Sbjct 8505 TGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 8564 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||||||||| || || || |||| ||| |||| |||| || || || Sbjct 8565 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAA 8624 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||| ||||||||||| || ||||||||||| ||| ||||| | || || || Sbjct 8625 CATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGTGG 8675 >seq10263 Length=10618 Score = 129 bits (142), Expect = 5e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| ||||| || || ||||| || || || || ||| | || Sbjct 10526 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 10467 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| |||| ||| || |||||||| ||||| || ||||| ||||| Sbjct 10466 GACACTATTGACAACGTCAAAAGTAAA-ATTCAAGACAAGGAAGGTATCCCTCCAGATCA 10408 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | |||||||||||||| || || ||||| || |||| |||| |||||||| Sbjct 10407 ACAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 10348 Query 24883 CATTCAAAAGGAATCGAC 24900 |||||| || || || || Sbjct 10347 CATTCAGAAAGAGTCTAC 10330 Score = 114 bits (126), Expect = 1e-20 Identities = 129/170 (76%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 24762 CCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 ||||||| | || |||| |||| ||| || ||||| |||||||| || ||||| ||| Sbjct 10301 CCGACACTATTGACAACGTCAAAAGTAAA-ATTCAAGATAAAGAAGGTATCCCTCCGGAT 10243 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 ||||| | ||||| ||||| || || || || || ||| |||| | |||| || || Sbjct 10242 CAACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTAC 10183 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||||||||| || || ||| |||||||| ||||| | || || Sbjct 10182 AACATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGATTGAGAGGTGG 10133 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || || ||||| ||||| || || || || ||| | | Sbjct 10131 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 10072 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | ||| || |||||||| ||||| || ||||| || || Sbjct 10071 GACACTATTGACAACGTTAAGTCGAAA-ATTCAAGACAAGGAAGGTATTCCTCCAGACCA 10013 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | ||||| |||||||| || || || || ||| |||| |||| || || || Sbjct 10012 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 9953 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||| || || || ||| | || ||| | ||| | || || Sbjct 9952 TATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGG 9905 >seq342 Length=506 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || ||||| || || || | ||||| ||| | | ||||| | || | || || Sbjct 497 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACAATGTCAAGTCC 438 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||| ||||| || || || || |||||| | ||||||||||| || || Sbjct 437 AAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 378 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || |||| || |||| | |||| || || ||||||||||| ||||| || | ||| Sbjct 377 CAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCCACTTTGCAC 318 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 || || ||| ||||| | || || Sbjct 317 TTAGTCTTGAGATTGAGAGGTGG 295 >seq7489 Length=15256 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776 |||| || | || ||||| || || || | ||||| ||| | | ||||| | || | Sbjct 541 TTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACA 482 Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836 || || |||||||||||||| ||||| || || || || |||||| | ||||||| Sbjct 481 ATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 422 Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896 |||| || || || |||| || |||| | || || || ||||| |||||||||| Sbjct 421 TTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAAT 362 Query 24897 CGACACTACACTTGGTGTTGCGATT 24921 | || |||| ||||| ||| |||| Sbjct 361 CCACTTTACATTTGGTCTTGAGATT 337 >seq2206 Length=135 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/109 (78%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 24803 GAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCG 24862 ||||| || ||||| ||||||||| | |||||||||||||| || ||||| || || Sbjct 134 GAAGGTATCCCTCCAGATCAACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGT 75 Query 24863 AGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA-CTTG 24910 |||| |||| ||||| |||||||| ||||| || || |||| |||| Sbjct 74 AGAACGCTGTCTGATTACAACATTCAGAAGGAGTCCACCTTACATCTTG 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449832949714880