Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177835.1_202017-04- 25] 11,496 sequences; 12,629,710 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq95 131 1e-25 seq10263 129 5e-25 seq342 113 3e-20 seq7489 109 4e-19 >seq95 Length=15350 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || || || ||||| ||||| ||||| || || | Sbjct 8672 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8613 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | ||| || |||||| | ||||||||||| || || || ||| Sbjct 8612 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8553 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || |||||||| | || |||||| | || | |||||||||| ||| ||| Sbjct 8552 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8493 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || ||||| || || ||||| || || || || || ||||| || Sbjct 8492 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8443 >seq10263 Length=10618 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| | || || | ||||| ||||| || |||||||| || || |||| Sbjct 9905 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 9964 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || ||||| || || ||| | |||||||||||||| || || ||| Sbjct 9965 AGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 10024 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || |||||||| |||||| | || || | || | |||||||||| ||| || Sbjct 10025 ATACCTTCCTTGTCTTG-AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 10083 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || |||||||| || || || | || || || || || ||||| Sbjct 10084 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 10131 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| | ||| || ||||| |||||||||||||| | | || | | || || ||||| Sbjct 10323 ATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTG 10382 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 || || ||| | ||||||||||| ||||| || || ||||| || |||||||| | ||| Sbjct 10383 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 10442 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 |||||| | || | |||||| ||| ||| || || || |||||||| || || || Sbjct 10443 ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGT 10502 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || ||||| Sbjct 10503 TAGAGTTTTGACGAAAATTTGCAT 10526 >seq342 Length=506 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || || || || | |||||||||||||||||||| || || | Sbjct 295 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 354 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | || || | ||| || |||||| | ||||||||||| || || || || Sbjct 355 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 414 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || |||||||| | || |||||| | || | ||||||||| ||| ||| Sbjct 415 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 474 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTT 29771 || | ||| || || || ||||| || || || Sbjct 475 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTT 506 >seq7489 Length=15256 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || || | || |||||||| | |||||||| ||||| ||||| || || | Sbjct 328 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 387 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || | ||| || |||||| | ||||||||||| || || || || Sbjct 388 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 447 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || |||||||| | || |||||| | || | ||||||||| ||| ||| Sbjct 448 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 507 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777 || | ||| || || || ||||| || || ||||| || Sbjct 508 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385165227900936