Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177845.1_202017-04- 25] 2,975 sequences; 11,604,234 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1105 111 1e-19 seq975 86.0 4e-12 seq2698 82.4 5e-11 >seq1105 Length=21813 Score = 111 bits (122), Expect = 1e-19 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||||||||||||||| || |||||||| || || || |||||||| Sbjct 10062 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 10003 Query 33202 CAAATTGAGTT----GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257 || | ||| ||| |||| |||||| || ||| || || | ||| || || | Sbjct 10002 CA----GCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTG 9947 Query 33258 TGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317 || || ||||| || || ||| ||| || | | ||| |||||| | || Sbjct 9946 GAGGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATT 9887 Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| || || ||||| || || || || |||||||| |||||||||||||| Sbjct 9886 CAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 9835 >seq975 Length=16953 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200 |||| ||||| || | ||| ||||| || | || || || ||||| || ||||| || | Sbjct 3126 CACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGG 3067 Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260 ||||| | || ||||||||||| ||| ||| || || | ||| ||||| | | Sbjct 3066 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 3007 Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320 | || ||||| || || ||| || || | | ||| ||||| | || || Sbjct 3006 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 2947 Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 | ||||| || || || || || || | ||| || |||||||||||||| || Sbjct 2946 CTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 2895 >seq2698 Length=18034 Score = 82.4 bits (90), Expect = 5e-11 Identities = 150/220 (68%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| || | ||| || || ||||| || || |||||||| || ||||| ||||| Sbjct 260 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 319 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | ||| ||||||||||| ||| ||| || || | ||| ||||| | || Sbjct 320 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 379 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || |||| || || | | ||| ||||| | || ||| Sbjct 380 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 439 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAA 33361 |||| ||| || || || || || | ||| || || ||| Sbjct 440 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318766041821550