Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177845.1_202017-04- 25] 2,975 sequences; 11,604,234 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2179 181 3e-40 seq2542 147 6e-30 seq1925 131 5e-25 seq2137 102 2e-16 seq1533 84.2 6e-11 >seq2179 Length=7629 Score = 181 bits (200), Expect = 3e-40 Identities = 482/732 (66%), Gaps = 12/732 (2%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 |||||| ||||| |||||||| | ||| || ||||||| ||||| || || || || Sbjct 2168 GTATTCAACAATTTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATT 2109 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 |||||| |||||||||||||||||||| | || | | || || || || || | || || Sbjct 2108 AGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGC 2049 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTG--CCTTCC 155807 |||| ||| ||| | | |||| |||| | || || | ||||| Sbjct 2048 TTCCAAAATGGAATACCATAATTTTTGGGC-----TTTGATAGTCTTACCACGACCTTCT 1994 Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG- 155866 ||| || |||| || | | || |||||||||||||| || | ||||| Sbjct 1993 TTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGA 1934 Query 155867 GCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATAC 155926 || | | || | | || | | ||| | ||| | ||||||| ||| || | Sbjct 1933 GCTGATGTTGGAG-AGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAG 1875 Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATT 155986 |||| ||| | |||| ||| | || ||||| ||||| | ||||| || Sbjct 1874 ATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTT 1815 Query 155987 CTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA 156046 ||||| | || | || || ||||||| ||| ||| ||||| || | ||||| Sbjct 1814 CTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAA 1755 Query 156047 ACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACC 156103 |||| || || |||||||| || ||||| || ||||| |||||||| |||| Sbjct 1754 CGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACG 1695 Query 156104 TAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGA 156163 | ||||||||| | ||| || ||||| || || || || ||| | ||||||| ||| Sbjct 1694 AATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGA 1635 Query 156164 GCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTC 156223 |||| ||||| |||||||| ||||||||||| | ||| ||||| ||| ||||| Sbjct 1634 ACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTC 1575 Query 156224 CTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGA 156283 ||| | || | | |||| || || ||||| || || | ||| | | | | || || Sbjct 1574 CTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGA 1515 Query 156284 ACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA 156343 | ||||||| ||| || || || ||||| | || || | || ||| ||||||| Sbjct 1514 GGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATA 1455 Query 156344 CTTATTAGACAT 156355 || |||||| Sbjct 1454 TTTTAGAGACAT 1443 >seq2542 Length=14171 Score = 147 bits (162), Expect = 6e-30 Identities = 240/341 (70%), Gaps = 6/341 (2%) Strand=Plus/Minus Query 156012 ATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCC 156068 ||||| | ||| |||||||| | | || ||| |||| |||||| |||||| Sbjct 6178 ATATCTGCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCC 6119 Query 156069 TGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAA 156128 || || ||||| || ||||| |||||||| |||| | ||||||||| | || || ||| Sbjct 6118 TGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAA 6059 Query 156129 GTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCC 156187 || || ||||| || |||| ||| ||||| | || || | || | ||||| || || Sbjct 6058 GTACCGTTGGTACCAGCGA-TATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACC 6000 Query 156188 AATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTC 156247 || |||||||| ||| ||||| ||| ||||| || | ||||| |||||||||| Sbjct 5999 AACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTC 5940 Query 156248 AATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCC 156307 ||||| ||||| | ||| | | || | || ||| | |||||| |||| || || Sbjct 5939 GATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACC 5880 Query 156308 AGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTA 156347 ||||||||||| || || | || ||| | || || |||| Sbjct 5879 AGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTA 5839 >seq1925 Length=42165 Score = 131 bits (144), Expect = 5e-25 Identities = 256/378 (68%), Gaps = 3/378 (1%) Strand=Plus/Plus Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908 ||| ||||| ||||||| | ||||||| || | ||||||| ||| || || | Sbjct 20362 CCTGTCAAATCTACCAGGCCTTAATAATGCTTTATCGAGAATATCGGGTCTATTGGTACC 20421 Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968 || || ||||||| || | | | | || |||||||| | ||| |||||||| Sbjct 20422 AGCTAAAACAACAACGTGGTCAGCTGGAGTGAAACCATCCATTTCTACTAACATTTGATT 20481 Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028 || || | || || |||||||| | |||| ||| |||| | || |||| Sbjct 20482 TAGCGTGTTCTCTCTCTCATCATTGGCACCTGAAAAATTACCCTTTTGTCTTGCTTTT-- 20539 Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 || | |||||||||||||||||| || | | | || | ||||| ||| ||| || Sbjct 20540 -CCTATAGCATCAATTTCGTCAATAAACACAATCGAGGGTGCATTTTCTCTTGCAGTTTT 20598 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 || || |||||||| | | ||| |||| ||||||| |||||||||||||||| ||| | Sbjct 20599 GAACAAATCTCTTACTCTTGCTGCACCAACACCAACAAACATTTCTACAAATTCTGAACC 20658 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || || | || | ||| ||||| |||||| |||| | || || | || || Sbjct 20659 AGAAACAAAATAAAACGGAACACCGGCTTCACCTGCTGTTGCCTTTGCAAGCAAAGTTTT 20718 Query 289209 ACCTGTTCCAGGTGGTCC 289226 ||| || || ||||| || Sbjct 20719 ACCGGTACCTGGTGGACC 20736 >seq2137 Length=36613 Score = 102 bits (112), Expect = 2e-16 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 |||||| ||| |||| ||| || ||| || ||||| | | || | ||||||||| Sbjct 2745 TTTCTTGTGGTGTTATCGTAATGAACCATGATATCTTCTAGAGCTTTCACTAAACGACGT 2686 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 ||||||||||| ||| | |||||| || || ||||| || ||||| ||||||||||| Sbjct 2685 TGAATATAACCTGTTTCGGCTGTTTTGACGGCGGTATCGATAAGACCTTCACGACCACCC 2626 Query 302659 ATAGCATGGAAGAATAGCTCT--TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGA 302716 || |||||||| || | ||| | |||| | || | ||| | | ||| ||||||| | Sbjct 2625 ATTGCATGGAAAAAAAATTCTTGTGGGGTC-AAACCTCTCAA-ATATGAGTTCTCAACAA 2568 Query 302717 AACC 302720 |||| Sbjct 2567 AACC 2564 >seq1533 Length=23890 Score = 84.2 bits (92), Expect = 6e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||||| | |||||||||| ||||||||||| || || || || | || || | Sbjct 11108 TGGGCAACAGTCATACGAGATGGAATAGCATGAGGGTTAATAATCAAATCTGGAACAATA 11049 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || || || || || |||||||| || || | ||| || | |||||||| |||||||| Sbjct 11048 CCTTCTGCGGTAAATGGCATATC-TTCTCTACGATATGTGATACCAATAGTACCCTTTTG 10990 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||| || || |||||||| Sbjct 10989 ACCGTGACGAGAAGCAAATTTGTCACCAAT 10960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471761498452575