Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177845.1_202017-04-
25] 2,975 sequences; 11,604,234 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1880 181 2e-40
seq975 163 6e-35
seq2698 159 7e-34
seq1105 156 9e-33
seq1653 127 4e-24
>seq1880
Length=17810
Score = 181 bits (200), Expect = 2e-40
Identities = 160/200 (80%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| ||| ||| ||||||||||||||||||| || || | || || ||
Sbjct 498 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCGTCTTCC 557
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || ||||||||||| | |||||||||| || ||||| ||||||||||||
Sbjct 558 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGG 617
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || |||| || ||||| |||| ||| ||||| | |||||| ||||||
Sbjct 618 ATCTTGGACTTGACATTATCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTA 677
Query 283071 CCCGTCAAAGTCTTAACGAA 283090
|| |||||||||||||||||
Sbjct 678 CCAGTCAAAGTCTTAACGAA 697
>seq975
Length=16953
Score = 163 bits (180), Expect = 6e-35
Identities = 153/195 (78%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | | || | ||||| || | ||| || || |||||
Sbjct 3089 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 3030
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | |||||||||| |||||||| ||||||||||||||||| | || || |
Sbjct 3029 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 2970
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||| ||||| || || || |||||||| || |||||||| ||
Sbjct 2969 GTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 2910
Query 283088 GAATATCTGCATTTT 283102
||| || ||||| ||
Sbjct 2909 GAAAATTTGCATCTT 2895
>seq2698
Length=18034
Score = 159 bits (176), Expect = 7e-34
Identities = 154/195 (79%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTG 282955
|| || ||| ||||||||| ||||||||||||| |||| || | || || || | |||
Sbjct 285 TGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCCAATTG 343
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
|| || ||||||||||| | |||||||||| || ||||| ||||||||||| |||||
Sbjct 344 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTT 403
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
|| || || | || |||||||| |||| ||| ||||| | |||||| |||||||| ||
Sbjct 404 TGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 463
Query 283076 CAAAGTCTTAACGAA 283090
||||||||| || ||
Sbjct 464 CAAAGTCTTGACAAA 478
>seq1105
Length=21813
Score = 156 bits (172), Expect = 9e-33
Identities = 152/193 (79%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||| ||||||||||||||||||| |||| || | || || ||||| || || |||||||
Sbjct 9798 TTCCTTTTGGATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCTAGCTGCTTACCGGCAA 9740
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
||||||| | ||||| || || ||||| |||||||| ||||| || | || |||
Sbjct 9739 AGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGT 9680
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
||||||| ||||| || | ||| || || | |||||| || ||||| |||||||||||||
Sbjct 9679 TATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAA 9620
Query 283087 CGAATATCTGCAT 283099
| || ||||||||
Sbjct 9619 CAAAGATCTGCAT 9607
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || | || || |||||||| ||| || || || |||||||| ||||
Sbjct 9606 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 9547
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||| | || || ||||| || || |||||||||||||| | |||||| || ||
Sbjct 9546 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 9487
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||| ||||||||||| || || | || ||| | ||||| || || |||| ||| ||
Sbjct 9486 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 9427
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | || || || ||||| ||||||||||| ||||| ||||||||
Sbjct 9426 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 9379
Score = 141 bits (156), Expect = 2e-28
Identities = 146/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||| || |||||||| | ||||| | ||||| |||||||| || ||||||||
Sbjct 10497 TCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAA 10438
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | ||| ||||| |||||||| ||||||||||| || || | || ||| |
Sbjct 10437 ATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTG 10378
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| |||||||| |||| ||| || || || || || |||||||| |||| ||||| ||
Sbjct 10377 TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACA 10318
Query 283089 AATATCTGCAT 283099
|| || |||||
Sbjct 10317 AAAATTTGCAT 10307
Score = 138 bits (152), Expect = 2e-27
Identities = 158/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||| ||||| ||||| || ||||| || |||| ||||| | || || ||
Sbjct 10043 ACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCC 9984
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
||||| || |||||||| ||||| | |||||| || |||||||| |||||||||||
Sbjct 9983 AGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGA 9924
Query 283011 ATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
|| ||| ||||| ||| | || |||||||| |||| ||| || || || || || |||||
Sbjct 9923 AT-TTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTT 9865
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || | ||| || ||||| || |||||
Sbjct 9864 CCCTGTTAGAGTTTTGACGAAAATTTGCAT 9835
>seq1653
Length=149
Score = 127 bits (140), Expect = 4e-24
Identities = 114/143 (80%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001
|| || || | ||| || || ||||||||||| | |||||||||| || ||||| |||
Sbjct 143 CCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCC 84
Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061
|||||||||||||| | || || |||| || ||||| |||| ||| ||||| | ||||
Sbjct 83 TTGTCTTGGATCTTGGACTTGACATTATCAATGGTGTCAGAAGATTCAACTTCCAAAGTG 24
Query 283062 ATCGTCTTACCCGTCAAAGTCTT 283084
|| |||||||| |||||||||||
Sbjct 23 ATGGTCTTACCAGTCAAAGTCTT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046699301245650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |