Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177855.1_202017-04-
25] 3,479 sequences; 11,610,080 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1089 118 9e-22
seq3308 102 7e-17
seq1863 96.9 3e-15
seq483 96.9 3e-15
>seq1089
Length=202
Score = 118 bits (130), Expect = 9e-22
Identities = 127/168 (76%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|||||| || || | |||||| || ||| ||||| ||||| || ||||| |||||
Sbjct 16 CGACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCA 75
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||| ||| |||||| | ||| |||||||| ||||| | |||| | ||||||||
Sbjct 76 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 135
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||| ||||| ||||| | ||||| ||||| ||||||||||| ||
Sbjct 136 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 183
>seq3308
Length=1291
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||| |||||| | || || || || ||||| || || | |||||| | ||||| || |
Sbjct 524 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 465
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
||||| || || | ||||| ||||| ||||| ||||| || || || ||
Sbjct 464 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 405
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
||||| ||| |||| | | || |||||| | ||||||| |||| | ||| ||
Sbjct 404 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 345
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| ||||| |||||||| | || || || || ||||||||||| ||
Sbjct 344 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 294
>seq1863
Length=22686
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059
||||| || || || ||||| || | || || | ||||| || | ||||||||
Sbjct 10788 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 10729
Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119
|| | ||||| ||||| ||||| ||||| || || || || ||||| ||| ||
Sbjct 10728 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 10669
Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179
|| | | || |||||| | ||||| | |||| | | || || ||||||||||||
Sbjct 10668 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 10609
Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| || | || ||||| || ||||||||||| ||
Sbjct 10608 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 10571
>seq483
Length=154
Score = 96.9 bits (106), Expect = 3e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|||||| || || | |||||| |||||| || |||||||| || ||||| |||||
Sbjct 139 CGACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCA 80
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||||||| |||||| | || |||||||| ||||||| |||| | | || || ||
Sbjct 79 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 20
Query 24170 CATTCAAAAAGAATCTAC 24187
||| ||||| ||||||||
Sbjct 19 CATCCAAAAGGAATCTAC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429917770579245
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |