Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177855.1_202017-04-
25] 3,479 sequences; 11,610,080 total letters
Query= NC_015265.1
Length=37236
Score E
Sequences producing significant alignments: (Bits) Value
seq3239 1642 0.0
seq3061 407 3e-109
>seq3239
Length=1032
Score = 1642 bits (1820), Expect = 0.0
Identities = 956/996 (96%), Gaps = 24/996 (2%)
Strand=Plus/Minus
Query 9217 GGCCGCCGATTGGCCTGGAACGGATGCTGCGGATCTACTTGCTGCAGCAGTGGTACGGGT 9276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032 GGCCGCCGATTGGCCTGGAACGGATGCTGCGGATCTACTTGCTGCAGCAGTGGTACGGGT 973
Query 9277 TGTCGGACGAAGGGCTTGAAGATGCGCTCTACGACAGCATCGCGATGCGCGCCTTCGCGG 9336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 972 TGTCGGACGAAGGGCTTGAAGATGCGCTCTACGACAGCATCGCGATGCGCGCCTTCGCGG 913
Query 9337 GCATCGACCTGGCGCGCGAGAACGTGCCGGACGCCACCACGCTGTTGAAATTCCGGCGC- 9395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 912 GCATCGACCTGGCGCGCGAGAACGTGCCGGACGCCACCACGCTGTTGAAATTCCGGNNNN 853
Query 9396 ----------------CTGCTGGTCGAGCACGCACTGACGCGAAAGCTGTTCGACGAGAT 9439
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 852 NNNNNNNNNNNNNNNNCTGCTGGTCGAGCACGCACTGACGCGAAAGCTGTTCGACGAGAT 793
Query 9440 CGGCATCGAGTTGTGCGAGCGCGGGCTGATGATGAAGGAAGGCACGCTGGTGGATGCGAC 9499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 792 CGGCATCGAGTTGTGCGAGCGCGGGCTGATGATGAAGGAAGGCACGCTGGTGGATGCGAC 733
Query 9500 GATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGAGCCGTGACCCGGAGATGCA 9559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 732 GATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGAGCCGTGACCCGGAGATGCA 673
Query 9560 TCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCCATGTCGGCGTCGACGC 9619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 672 TCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCCATGTCGGCGTCGACGC 613
Query 9620 CGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACGAGCCGGACGTATCGCA 9679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 612 CGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACGAGCCGGACGTATCGCA 553
Query 9680 GGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCGATGCGGGCTACACCGG 9739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 552 GGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCGATGCGGGCTACACCGG 493
Query 9740 CGTGGACAAGCGCGAGGAGATGAAGGGCAAGACGGTGAAGTGGCACGTGGCGCTCAAGCG 9799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 492 CGTGGACAAGCGCGAGGAGATGAAGGGCAAGACGGTGAAGTGGCACGTGGCGCTCAAGCG 433
Query 9800 CGGAAAGATCAGGGCGATGCAGGAAGGTCCGCTGAAGGACCTCGTGATCG-------CGG 9852
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 432 CGGAAAGATCAGGGCGATGCAGGAAGGTCCGCTGAAGGACCTCGTGATCGNNNNNNNNNN 373
Query 9853 TCGAGCGAACCAAGGCGCAGATCCGCGCCCGGGTCGAGCATCCGTTTCATGTCGTGAAGA 9912
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 372 NNNNNNNNNCCAAGGCGCAGATCCGCGCCCGGGTCGAGCATCCGTTTCATGTCGTGAAGA 313
Query 9913 ACCTGTTTCGTCATCGCAAGGTGCGCTACAAGGGTCTAGCCAGGAACACGGCACAGCTGT 9972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 312 ACCTGTTTCGTCATCGCAAGGTGCGCTACAAGGGTCTAGCCAGGAACACGGCACAGCTGT 253
Query 9973 TCAGTCTGTTCGCGCTGGCGAACCTGGTGATCGCGAAAAATCAGCTGTTGTCGACTCATG 10032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 252 TCAGTCTGTTCGCGCTGGCGAACCTGGTGATCGCGAAAAATCAGCTGTTGTCGACTCATG 193
Query 10033 GGAGCAATCCGTCATGTGTGTGAAAAACGCGGGAAGTGAGGCCCGAATACGAGCGAAACT 10092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 192 GGAGCAATCCGTCATGTGTGTGAAAAACGCGGGAAGTGAGGCCCGAATACGAGCGAAACT 133
Query 10093 CACCTCGCATGTCGTCAAATTCCTACGTCAATCTGAAAATTGCAACCTGCCTCGTCCGTT 10152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 132 CACCTCGCATGTCGTCAAATTCCTACGTCAATCTGAAAATTGCAACCTGCCTCGTCCGTT 73
Query 10153 ATGCGGACGACAGGCTCATTGATCAGCGTTTCCCTA 10188
||||||||||||||||||||||||||||||||| ||
Sbjct 72 ATGCGGACGACAGGCTCATTGATCAGCGTTTCCTTA 37
>seq3061
Length=225
Score = 407 bits (450), Expect = 3e-109
Identities = 225/225 (100%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 8984 TGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCGTTGTAGAAAGAAGCTC 9043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 225 TGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCGTTGTAGAAAGAAGCTC 166
Query 9044 ACGGAACGGACCCACGACGATGCAGCGGCAGATCGGTTTTGCGGAAGCGGAAAGTGCGGG 9103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 165 ACGGAACGGACCCACGACGATGCAGCGGCAGATCGGTTTTGCGGAAGCGGAAAGTGCGGG 106
Query 9104 CAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGGAGAAGGTCGTCCCTTG 9163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 105 CAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGGAGAAGGTCGTCCCTTG 46
Query 9164 GTCGCGGCTGCTGTCGGTGATCGGGCCGTATTACCCGAAGGGCGA 9208
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 45 GTCGCGGCTGCTGTCGGTGATCGGGCCGTATTACCCGAAGGGCGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119028682350004
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