Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177855.1_202017-04- 25] 3,479 sequences; 11,610,080 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq3239 1642 0.0 seq3061 407 3e-109 >seq3239 Length=1032 Score = 1642 bits (1820), Expect = 0.0 Identities = 956/996 (96%), Gaps = 24/996 (2%) Strand=Plus/Minus Query 9217 GGCCGCCGATTGGCCTGGAACGGATGCTGCGGATCTACTTGCTGCAGCAGTGGTACGGGT 9276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1032 GGCCGCCGATTGGCCTGGAACGGATGCTGCGGATCTACTTGCTGCAGCAGTGGTACGGGT 973 Query 9277 TGTCGGACGAAGGGCTTGAAGATGCGCTCTACGACAGCATCGCGATGCGCGCCTTCGCGG 9336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 972 TGTCGGACGAAGGGCTTGAAGATGCGCTCTACGACAGCATCGCGATGCGCGCCTTCGCGG 913 Query 9337 GCATCGACCTGGCGCGCGAGAACGTGCCGGACGCCACCACGCTGTTGAAATTCCGGCGC- 9395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 912 GCATCGACCTGGCGCGCGAGAACGTGCCGGACGCCACCACGCTGTTGAAATTCCGGNNNN 853 Query 9396 ----------------CTGCTGGTCGAGCACGCACTGACGCGAAAGCTGTTCGACGAGAT 9439 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 852 NNNNNNNNNNNNNNNNCTGCTGGTCGAGCACGCACTGACGCGAAAGCTGTTCGACGAGAT 793 Query 9440 CGGCATCGAGTTGTGCGAGCGCGGGCTGATGATGAAGGAAGGCACGCTGGTGGATGCGAC 9499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 792 CGGCATCGAGTTGTGCGAGCGCGGGCTGATGATGAAGGAAGGCACGCTGGTGGATGCGAC 733 Query 9500 GATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGAGCCGTGACCCGGAGATGCA 9559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 732 GATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGAGCCGTGACCCGGAGATGCA 673 Query 9560 TCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCCATGTCGGCGTCGACGC 9619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 672 TCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCCATGTCGGCGTCGACGC 613 Query 9620 CGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACGAGCCGGACGTATCGCA 9679 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 612 CGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACGAGCCGGACGTATCGCA 553 Query 9680 GGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCGATGCGGGCTACACCGG 9739 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 552 GGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCGATGCGGGCTACACCGG 493 Query 9740 CGTGGACAAGCGCGAGGAGATGAAGGGCAAGACGGTGAAGTGGCACGTGGCGCTCAAGCG 9799 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 492 CGTGGACAAGCGCGAGGAGATGAAGGGCAAGACGGTGAAGTGGCACGTGGCGCTCAAGCG 433 Query 9800 CGGAAAGATCAGGGCGATGCAGGAAGGTCCGCTGAAGGACCTCGTGATCG-------CGG 9852 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 432 CGGAAAGATCAGGGCGATGCAGGAAGGTCCGCTGAAGGACCTCGTGATCGNNNNNNNNNN 373 Query 9853 TCGAGCGAACCAAGGCGCAGATCCGCGCCCGGGTCGAGCATCCGTTTCATGTCGTGAAGA 9912 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 372 NNNNNNNNNCCAAGGCGCAGATCCGCGCCCGGGTCGAGCATCCGTTTCATGTCGTGAAGA 313 Query 9913 ACCTGTTTCGTCATCGCAAGGTGCGCTACAAGGGTCTAGCCAGGAACACGGCACAGCTGT 9972 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 312 ACCTGTTTCGTCATCGCAAGGTGCGCTACAAGGGTCTAGCCAGGAACACGGCACAGCTGT 253 Query 9973 TCAGTCTGTTCGCGCTGGCGAACCTGGTGATCGCGAAAAATCAGCTGTTGTCGACTCATG 10032 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 252 TCAGTCTGTTCGCGCTGGCGAACCTGGTGATCGCGAAAAATCAGCTGTTGTCGACTCATG 193 Query 10033 GGAGCAATCCGTCATGTGTGTGAAAAACGCGGGAAGTGAGGCCCGAATACGAGCGAAACT 10092 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 192 GGAGCAATCCGTCATGTGTGTGAAAAACGCGGGAAGTGAGGCCCGAATACGAGCGAAACT 133 Query 10093 CACCTCGCATGTCGTCAAATTCCTACGTCAATCTGAAAATTGCAACCTGCCTCGTCCGTT 10152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 132 CACCTCGCATGTCGTCAAATTCCTACGTCAATCTGAAAATTGCAACCTGCCTCGTCCGTT 73 Query 10153 ATGCGGACGACAGGCTCATTGATCAGCGTTTCCCTA 10188 ||||||||||||||||||||||||||||||||| || Sbjct 72 ATGCGGACGACAGGCTCATTGATCAGCGTTTCCTTA 37 >seq3061 Length=225 Score = 407 bits (450), Expect = 3e-109 Identities = 225/225 (100%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 8984 TGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCGTTGTAGAAAGAAGCTC 9043 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 225 TGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCGTTGTAGAAAGAAGCTC 166 Query 9044 ACGGAACGGACCCACGACGATGCAGCGGCAGATCGGTTTTGCGGAAGCGGAAAGTGCGGG 9103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 165 ACGGAACGGACCCACGACGATGCAGCGGCAGATCGGTTTTGCGGAAGCGGAAAGTGCGGG 106 Query 9104 CAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGGAGAAGGTCGTCCCTTG 9163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 105 CAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGGAGAAGGTCGTCCCTTG 46 Query 9164 GTCGCGGCTGCTGTCGGTGATCGGGCCGTATTACCCGAAGGGCGA 9208 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45 GTCGCGGCTGCTGTCGGTGATCGGGCCGTATTACCCGAAGGGCGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119028682350004