Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177855.1_202017-04-
25] 3,479 sequences; 11,610,080 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq1089 118 2e-21
seq1863 102 1e-16
seq380 87.8 3e-12
>seq1089
Length=202
Score = 118 bits (130), Expect = 2e-21
Identities = 128/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 146090 CGATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCA 146149
||| |||||| | || || |||| |||||| ||| || ||||| ||||| || |||||
Sbjct 16 CGACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCA 75
Query 146150 ACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAA 146209
||||||| | |||||||| ||||| ||| | || || ||||||| | | ||||||||
Sbjct 76 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 135
Query 146210 TATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
|| || ||||| || || | ||||| || || |||| ||||| ||||
Sbjct 136 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTA 185
>seq1863
Length=22686
Score = 102 bits (112), Expect = 1e-16
Identities = 151/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105
|| || || || || || || || ||| | || || ||| | || || ||| | |||
Sbjct 10782 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACAAT 10723
Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165
|| || || || ||| || ||||| || ||||| || ||||||||| | || |||
Sbjct 10722 GTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 10663
Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225
|| ||||| ||||| || || |||||| || | || || || || |||||||||||
Sbjct 10662 GCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAATCC 10603
Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
||| | || ||||| || |||| ||||| ||||
Sbjct 10602 ACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTA 10569
>seq380
Length=9850
Score = 87.8 bits (96), Expect = 3e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | || || || || || ||||| || || | || || ||| | ||
Sbjct 425 TGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTGCG 366
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || | || || || ||||| ||| || ||||| || || || |||||||
Sbjct 365 ATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAAC 306
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | || ||||| ||||| || |||| || ||||||| | | ||||| || |
Sbjct 305 AAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAACA 246
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || || || || || | ||| | || || | ||||||| ||||
Sbjct 245 TTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGGTA 198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786132211588680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |