Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177855.1_202017-04- 25] 3,479 sequences; 11,610,080 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1011 107 2e-18 >seq1011 Length=2633 Score = 107 bits (118), Expect = 2e-18 Identities = 376/581 (65%), Gaps = 19/581 (3%) Strand=Plus/Minus Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 ||||| || |||||||| || || | ||||| || |||| |||||||| || ||| Sbjct 2183 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 2124 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || ||||| || ||||| | |||| ||||| | ||| || || | ||||| || ||| Sbjct 2123 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 2064 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 || || || | ||| |||| | |||||||| || || | | |||||| || | | Sbjct 2063 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 2004 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA----ATTGT 23735 || ||||||| || | ||| | |||||| | || | | || || Sbjct 2003 GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGATGGT 1948 Query 23736 TTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAG 23795 | ||| || || || | || |||||| | || | || || ||||| || | Sbjct 1947 GTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAA 1888 Query 23796 TAA--ACTATACATTT--CAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAAC 23851 || | | |||| |||||||||||||| || || || || || |||| Sbjct 1887 CAAGGAGTNNNNNNNNNNCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAAC 1828 Query 23852 ATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAA 23911 | || || | | ||| || || | | || ||| | | || ||||| ||||||| Sbjct 1827 TCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAA 1768 Query 23912 TACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT--AAAATGTCT--TTCATCA 23967 |||| ||| ||| || || || |||||||| || ||||| ||| ||| || Sbjct 1767 TACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTC-TC- 1710 Query 23968 GTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCA 24026 ||| || | || ||||| |||| ||||| || || ||||||| ||| ||| | ||||| Sbjct 1709 GTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCA 1650 Query 24027 AAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067 ||| || ||||||||| || | |||| || |||| Sbjct 1649 GAAAGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCAT 1609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521465321790600