Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04- 25] 7,513 sequences; 13,166,602 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq282 107 3e-19 seq5133 104 4e-18 >seq282 Length=24297 Score = 107 bits (118), Expect = 3e-19 Identities = 186/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 2817 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 2875 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| | Sbjct 2876 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 2935 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || ||||| |||| | | |||| ||| || || | || || || Sbjct 2936 CAGAGCCGTCTTGAAATCCTTCTTGGAATCCGTCATCAGGGACTCTGTTACTTACACTGA 2995 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || ||||| | || ||||| ||||| | ||||| Sbjct 2996 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 3055 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 3056 TAGAACCTTATATGGTTTCGGTGGTTAA 3083 >seq5133 Length=12562 Score = 104 bits (114), Expect = 4e-18 Identities = 186/269 (69%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| |||||||||||||||| || || ||||||||||| Sbjct 11376 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATTACTAAGCCAGCTAT 11318 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| | Sbjct 11317 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 11258 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || ||||| |||| | | |||| ||| || || | || || || Sbjct 11257 CAGAGCCGTCTTGAAATCCTTCTTGGAATCCGTCATCAGGGACTCTGTTACTTACACTGA 11198 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || ||||| | || ||||| ||||| | ||||| Sbjct 11197 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 11138 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | | | || ||||| || |||||| Sbjct 11137 TAGAACCTTATACGGTTTCGGTGGTTAAT 11109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79068330811509