Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04- 25] 7,513 sequences; 13,166,602 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq6389 235 2e-57 seq3216 132 2e-26 >seq6389 Length=2098 Score = 235 bits (260), Expect = 2e-57 Identities = 559/829 (67%), Gaps = 32/829 (4%) Strand=Plus/Plus Query 60077 GATGTCATAAGGAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGGAACGTGAC 60136 || ||| || || ||||| ||| ||| |||| ||| ||| || || |||||||| Sbjct 900 GACGTCGTACGGCGAGAAGAGGTACATGTCCTCGTTCTTCTTCGCGAGCTCGAACGTGAT 959 Query 60137 ATCAGGAACGATAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTC 60196 || || | | || || || || || ||||| || |||||||||||||| ||||| || Sbjct 960 GTCCGGGATCACGACGCCGAGCGACAGCGTCTTGATGCGGATCTTCTCGTCCGCGTTCTC 1019 Query 60197 ACGCTTGGTATCCAGGAACGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCC 60256 |||||||| || |||||| | ||||||||||||||| |||| || || || || || Sbjct 1020 GCGCTTGGTGTCGAGGAACCGCATGATGTCGGGGTGGTGCGCGTGCAGGTACACGGCACC 1079 Query 60257 TGCGCCCTGCCTTGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGAATCTTCAT 60316 |||||||| | || || || ||||| | ||||||||| || || || | |||||| Sbjct 1080 GGCGCCCTGGCGCGCGCCGAGCTGGTTCGCGTAGGAGAACGAGTCCTCGAGCAGCTTCAT 1139 Query 60317 CACAGGGATGACTCCAGAGGCCTGACCTTCTCGA--CCCTTAATCGGAGCTCCTGCCTCG 60374 ||| |||||||| || || | ||| ||||||| ||| || || || || |||| Sbjct 1140 CACGGGGATGACGCCGGACGACTG--GTTCTCGATGTGCTTGATGGGCGCGCCGTGCTCG 1197 Query 60375 CGGAGGTTGGAGAATCCAATGCCGACTCCGCCACCACGCTTAGACAGCTGGAGAGAGTCC 60434 |||| ||| || | | | |||| ||||| || ||||| || ||||| || | | Sbjct 1198 CGGATGTTCGACAGGAGCAGGGCGACGCCGCCGCCGCGCTTGGAGAGCTGCAGCGCGGAG 1257 Query 60435 TGAACGATTCGACCGATGGACCCCATGGTGTCCTGAACATCGAGGATGAAGCATGATACT 60494 | | | || |||||||| ||||| |||||| | || | |||||| || || Sbjct 1258 TTGATGCCGCGCGCGATGGACTCCATGTTGTCCTCGATGCGCAGCAGGAAGCACGACACG 1317 Query 60495 GGCTTGCCTGCGTCGAGAAGCCCCG-CGTTGAGGAAGGTCGGAGTTGCAGGCTGGAAGAT 60553 |||| ||| ||| | | ||| |||||||||| || || || || ||||||||| Sbjct 1318 GGCTCGCC-GCGCTGCGCCTTGCCGACGTTGAGGAACGTGGGGGTCGCGGGCTGGAAGCG 1376 Query 60554 TCCCTTGATAATGAGATCCACAAGGGACT-CAGCGTGCTCGAAGTCTTCGCTGTAGTGGA 60612 ||| || |||| ||| | | | | ||||| | | || | || || | || Sbjct 1377 GCCC--GA-GATGACCTCCTCGACGATGTCCAGCGCG-GCCTGCTCGTTGCCGTCGGCGA 1432 Query 60613 TGGCCGTGAG-TACC------ACTCGATCTTCGTAGCGCTCGTAATAGCGCTTGCCATCG 60665 ||||| | | ||| || || || ||| |||||||| |||||||| || ||| Sbjct 1433 -GGCCGAGCGCGACCATGCAGACGCGGTCCTCGAAGCGCTCGAGGTAGCGCTTCCCGTCG 1491 Query 60666 TTAGTCTTCAAGGCGTAGGAGTTATAGAACTTCAGCGCTCCCATGTAGGTCTTGAAGCGG 60725 ||||| | | ||| || | ||| |||| | || || | | | |||| ||||||| Sbjct 1492 AACGTCTTGAGCGTGTACGACGTGTAGTACTTGAAGGCGCCGAGGAACGTCTCGAAGCGG 1551 Query 60726 AACTTGTGTCCGTAGGCCTGTTTCATGAGTCTCTTTAGGTCCTCGAAGCCGTA----GCG 60781 ||||| | ||||||| | | | ||| | | |||| | |||| ||| Sbjct 1552 AACTTCTTCGCGTAGGCGAACTCGAACAACGACTTCACGAACTCGCGGTCGTACTTCGCG 1611 Query 60782 AAGGACGACATCCTTGTCCCA-TAGTTGGACTTCCTCTGTGAGGTGATCCACCTTCTCCT 60840 |||||| || ||| | || ||| | ||| ||||| |||| ||||||| Sbjct 1612 -AGGACG---GCCGGGTCGTAGTACTTG----TTCTCGACGAGGTAGTCCAGCTTCTCCG 1663 Query 60841 CTAGGGAGTGAAAGAATACGGTGTTCTTGTTGACGTGCTCCAGGAAGTA 60889 | ||| ||| ||||| |||||||||| ||||||||||| ||||||||| Sbjct 1664 CGAGGTCGTGGAAGAAGACGGTGTTCTGGTTGACGTGCTGCAGGAAGTA 1712 >seq3216 Length=441 Score = 132 bits (146), Expect = 2e-26 Identities = 270/396 (68%), Gaps = 10/396 (3%) Strand=Plus/Plus Query 58400 GCAGCTTAGGCAACCTTCCACTTCCGTGCCTTCTA---CCGACTTAGCAGAGGTTCGGAT 58456 |||||| | |||||| || || |||||||| || | || || | | |||| ||||| Sbjct 51 GCAGCTGACGCAACCCTCGACCTCCGTGCCCTCCAGGGCCATCTGA-CGGAGG--CGGAT 107 Query 58457 GTAGTACAGAGACTTCAGGCCCTTCTTGTGAGCGTAGATCTGCGCTCGGTTAATGTCTCG 58516 |||||| || | ||| | |||||| |||||||||||||| ||||| | ||| || Sbjct 108 GTAGTAGAGCGTCTTGATGCCCTTGCGCCACGCGTAGATCTGCGCGCGGTTGACGTCGCG 167 Query 58517 CGTTGTCGCTGTATCTGGGAAGAACAGCGTGAGAGACATGCCCTGGTCTACCCAAGGAGA 58576 ||| || | || || ||||||||||||||| || |||||||| || | | Sbjct 168 CGTCGTGACCGTGTCCTTGAAGAACAGCGTGAGGCTCAGACCCTGGTCGACGTGCTGCGT 227 Query 58577 TGCTACAGCGTACATATCAATGATCGGGT--TAGGTCCGATAGCGTAAGCGCTATCAATT 58634 || | |||||| | || |||||| | ||| ||||| |||| ||| || Sbjct 228 CGCGGCGGCGTACGTGTCGATGATCTTCTCGTAG--CCGATCTCGTACGCGTCCTCGTAG 285 Query 58635 GATTCTACATTCTCATTGGTCACTCCGTACTGAGGGTAATAGACTCGACCAAGCTTACCC 58694 | || | || || || |||| | | ||||| ||||| || || | ||| ||| Sbjct 286 TACTCGAGGTTGTCGTTCGTCAGGTAGGGCGCCGGGTAGTAGACGCGCCCGATCTTGCCC 345 Query 58695 TCCTTGCGAACCTCAACAGGAGAGGTCACAGGGTGAATCGAGGCCGTGGCATGGTTAATG 58754 |||||||| | ||| | || | ||| ||||| ||||||| ||| | | ||| ||| Sbjct 346 TCCTTGCGGATCTCGATCTTCGACGGCACCGGGTGGATCGAGGACGTCGAGTTGTTGATG 405 Query 58755 TACGAGATAGAGCCGGTTGGTGGGATCGCCTGGAGG 58790 || ||||| ||||| || || |||| ||||||||| Sbjct 406 TAGGAGATCGAGCCCGTCGGCGGGACGGCCTGGAGG 441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225707331286220