Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04- 25] 7,513 sequences; 13,166,602 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq3663 562 3e-155 seq4760 407 2e-108 seq7376 82.4 8e-11 >seq3663 Length=1069 Score = 562 bits (622), Expect = 3e-155 Identities = 535/694 (77%), Gaps = 43/694 (6%) Strand=Plus/Minus Query 155959 GACGAGAAGGACGCGGAGGTGTGGAACCGGCTGACCAACAACTTCTGGCTGCCGGAGAAG 156018 |||||||||||| ||||||||| |||| || | |||||||||||||| ||||| Sbjct 1055 GACGAGAAGGACCTCGAGGTGTGGGACCGCCTCGTCGGGAACTTCTGGCTGCCCGAGAAA 996 Query 156019 ATCCCGGTGTCCAATGACGTCCAGTCGTGGCACCAGCTGACCGAGGAAGAGCGCCTGATC 156078 | |||||||| || ||| ||||||||||| || ||| |||| | | |||| | || Sbjct 995 GTGCCGGTGTCGAACGACATCCAGTCGTGGAACACGCTCACCGCGCAGGAGCAGGAGCTC 936 Query 156079 ACCATGCGGGTGTTCACCGGCCTGACGATGCTGGACACCATCCAGGGCACCGTCGGCGCG 156138 || ||||| || ||||||||||||||| |||||||||| ||||||||||| ||||||||| Sbjct 935 ACGATGCGCGTATTCACCGGCCTGACGCTGCTGGACACGATCCAGGGCACGGTCGGCGCG 876 Query 156139 GTCTCGCTCATCCCGGACGCCATCACCCCGCACGAGGAGGCGGTGTACACCAACATCGCG 156198 || ||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||| Sbjct 875 GTGTCGCTCATCCCCGACGCGATCACGCCGCACGAGGAAGCGGTGTACACCAACATCGCG 816 Query 156199 TTCATGGAGAGCGTGCACGCACGCAGCTACTCGAACATCTTCTCGACGCTGTGCTCCACC 156258 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||| Sbjct 815 TTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCGATCTTCTCGACGCTGTGCTCCACT 756 Query 156259 AAGGAGATCGACGCCGCGTTCCGCTGGTCGGAGGAGAACGCCAACCTGCAGAAGAAGGCT 156318 |||||||||| ||||||||||||||||||||||||| | ||||| ||| ||||| Sbjct 755 CGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGAGAACCCGAACCTCCAGCGCAAGGCC 696 Query 156319 GAGATCGTGCTCAGCTACTACAACGGTGACGACCCGCTCAAGCGCAAGGTCGCCTCCACG 156378 |||||||| | ||||||||| || ||| |||||||||||||||||||| |||| Sbjct 695 GAGATCGTCATGGACTACTACAAGGGCGACTCGCCGCTCAAGCGCAAGGTCGCGAGCACG 636 Query 156379 CTGCTGGAGGGCTTCCTGTTCTACAGCGGCTTC--------------------------- 156411 ||||| ||| ||||| |||||| ||||||| Sbjct 635 CTGCTCGAGTCATTCCTCTTCTACTCCGGCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNN 576 Query 156412 ----------TACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGA 156461 ||||||||||| |||||||||||| | |||||| || ||||| ||||| Sbjct 575 NNNNNNNNNNNNCCTGCCGATGTACTGGTCGTCGCGCGCCAAGCTGACGAACACGGCCGA 516 Query 156462 CATGATCCGGCTCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTT 156521 | | ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 515 CCTCATCCGCCTCATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTT 456 Query 156522 CCAGAAGGGCCTGGAGAAGGAGACC---AAGGCCCGCCAGCAGGAACTCAAGGACTACAC 156578 ||||||||| || |||||| || ||| ||| | || ||||||| ||||| Sbjct 455 CCAGAAGGGTCTCGAGAAGCTCTCCCCGGAGGAGCGC---GACGAGCTCAAGGCGTACAC 399 Query 156579 CTATGAGCTGCTGTTCGAGCTGTTCGACAACGAG 156612 | |||||||| |||||||||| ||| |||||| Sbjct 398 GTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAG 365 Score = 226 bits (250), Expect = 3e-54 Identities = 199/246 (81%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 156630 CCTCTACGACGCCACCGGCCAGACCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAA 156689 ||||||||||| | ||| | |||||||||||| |||||||||||||||||||||| ||| Sbjct 287 CCTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGCGGTACAACGCCAA 228 Query 156690 CAAGGCCCTGCAGAACCTGGGCTACGACGCGCTGTTCAGCCGCAG--CGACTGCGACGTC 156747 |||||| || |||||| |||||||| ||||| ||| || || ||| ||||||| Sbjct 227 CAAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTC--CCCAAGGACGAGACCGACGTC 170 Query 156748 AACCCGGCCATCCTGAGCGCGCTGTCGCCCGGTGGAGACGAGAACCACGACTTCTTCTCG 156807 |||||||| ||||| ||||||||||| | ||||||||||||||||||||||| Sbjct 169 AACCCGGCGATCCTCTCGGCGCTGTCGCCGAACGCCGACGAGAACCACGACTTCTTCTCC 110 Query 156808 GGGTCGGGCAGCACGTACGTCATGGCCAAGGGTGTGGTCACCGAAGACGACGACTGGGAC 156867 ||||| ||| |||||||||| | ||||| ||| |||||| ||||||||||||||| Sbjct 109 GGGTCCGGCTCGTCGTACGTCATCGGCAAGGCCGTGAACACCGAGGACGACGACTGGGAC 50 Query 156868 TTCTGA 156873 |||||| Sbjct 49 TTCTGA 44 >seq4760 Length=565 Score = 407 bits (450), Expect = 2e-108 Identities = 351/435 (81%), Gaps = 0/435 (0%) Strand=Plus/Minus Query 152885 CATCTTCGAGAGATTCACCGACCGCGCCCGTCGCGTCTGCGTCCTCGCCCAAGAGGAAGC 152944 ||| |||||||||||||| ||||| |||||||| ||| |||||||||||| || || || Sbjct 496 CATGTTCGAGAGATTCACAGACCGAGCCCGTCGGGTCGTCGTCCTCGCCCAGGAAGAGGC 437 Query 152945 GCGCATGCTCAACCATGCGTACATCGGCACCGAGCATCTGCTGCTCGGGCTGGTCCACGA 153004 ||| ||||||||||| ||||||||||||||||| | || ||||| || ||||||| Sbjct 436 GCGGATGCTCAACCACAACTACATCGGCACCGAGCACATCCTCCTCGGCCTCATCCACGA 377 Query 153005 GGGCGAGGGCGTAGCCGCCAAGGCGCTGCAGGCGCTCGACATCAACCTGGAGGAGGTGCG 153064 ||||||||| || || |||||||||||| || | |||| ||| ||| || | || || Sbjct 376 GGGCGAGGGTGTCGCGGCCAAGGCGCTGGAGTCCCTCGGGATCTCCCTCGACGGCGTCCG 317 Query 153065 TGCCGAGGTCGAGGAGATCATCGGCCACGGCCAGCAGGCACCCACCGGGCACATCCCGTT 153124 || |||| |||||||||||| | ||||||||||| || | ||||||||||||||| Sbjct 316 CACCCAGGTGACCGAGATCATCGGCGAGGGCCAGCAGGCCCCGAGCGGGCACATCCCGTT 257 Query 153125 CACCGACCGCTCCAAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGGCCA 153184 ||| ||| ||||| || || ||||||||||||||||||||||| ||||||||||| Sbjct 256 CACGCCGCGCGCCAAGAAGGTGCTCGAGCTGTCGCTGCGCGAGGCGCTCCAGCTCGGCCA 197 Query 153185 CAACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAGGGCGTGGG 153244 ||||||||||||||||||||| ||||||| | ||| ||||||||||| |||||||| | Sbjct 196 CAACTACATCGGCACCGAGCACATCCTGCTCGGCCTCATCCGCGAGGGCGAGGGCGTCGC 137 Query 153245 CTGCCAGGTGCTGGTGAAGCGCGGCGCGGAGCTGACCAAGGTCCGCCAGGTGGTCATCCA 153304 | |||||| ||| |||| ||||| || || | |||||| |||||| ||||||||| Sbjct 136 CGCCCAGGTCCTGACGAAGATGGGCGCCGACCTCAACAAGGTGCGCCAGCAGGTCATCCA 77 Query 153305 GCTGCTGTCCGGGTA 153319 ||| |||||||| || Sbjct 76 GCTCCTGTCCGGCTA 62 >seq7376 Length=214 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 ||||||| ||||||||||||||||||| ||||||||||| |||| || ||||||||| Sbjct 112 GCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGCAGGTTCAAAT 171 Query 92675 CCCACTCCCGCCACT 92689 || | ||||| ||| Sbjct 172 CCTGCCCCCGCTACT 186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526548945827760