Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04- 25] 7,513 sequences; 13,166,602 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq3505 370 3e-98 seq6680 230 8e-56 seq3261 215 2e-51 seq3903 140 1e-28 seq4505 98.7 3e-16 seq2881 86.0 2e-12 seq6084 80.6 9e-11 >seq3505 Length=1005 Score = 370 bits (410), Expect = 3e-98 Identities = 486/662 (73%), Gaps = 17/662 (3%) Strand=Plus/Minus Query 39036 GAGTCGAACGCACCGGCCTTGATCAAGGACTCGATGGCTCGCTTGCTCACGGTCGCCTGA 39095 |||||||||||||| |||||||| | |||||||||| |||||| | | | || Sbjct 869 GAGTCGAACGCACCTGCCTTGATGAGCGACTCGATGGTGCGCTTGTT---GCACACCACG 813 Query 39096 GTCGCTGCCTTC---AGGAAGTCCGGCAGGGAGGTGAACTTCCCCCAGGCTTCCCGGAGT 39152 | || |||| |||||||| | | || |||||| ||| | || || || Sbjct 812 GCCGGCACCTTGTCGAGGAAGTCGGTGAACGACGTGAACGCGCCCTTCTCCTCGCGC-GT 754 Query 39153 TCGGC-GATCTCCGCGACCATGCCCTCGCCCACGTTCTTCACGGCGGTCAGCCCGAAGCG 39211 ||| |||| | |||| | | | |||| ||||| |||| | || || |||||||| Sbjct 753 GCGGATGATCGCGTCGACGACGTTCGCGCCGACGTTGCGCACGCCCGTGAGGCCGAAGCG 694 Query 39212 GATCTCGT-GCTCCCCGTTGGGGGTGAACGA-GCTGTTCGAGACCGACACGTCGGGCGGC 39269 ||| ||| || | ||| ||||||| || | |||| | |||||| ||||| Sbjct 693 GATGTCGCCGCCCACCGC----GGTGAACTTCGCCGC-CGAGTCGTTCACGTCCGGCGGG 639 Query 39270 AGGACCCGAAGGCCCATGCGCCGAGACTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCG 39329 || || | | ||||||||| ||||| |||||| ||||| ||||| ||||||| Sbjct 638 AGCACGGTGATGTGCATGCGCCGGCACTCGTTGAGGTAGAGGGCCAGCTTGTCCTTGTCG 579 Query 39330 TCGCCCACCGAGGTG-AGCGCAGCCGCCATGTACTCGGCTGGGTAGTGCGTCTTCAGCCA 39388 |||| ||| | || || |||||||||||||| | ||||||| || ||| || | Sbjct 578 TCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGTTCGCCTTGAGGAA 520 Query 39389 CGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCGTAGCC 39448 |||||| | |||||| | ||| |||||| | || |||||||||||||||||||||||||| Sbjct 519 CGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCGTAGCC 460 Query 39449 AGCGAACGGGACCAGCACGTCCCACACTGCCTGGATGGCACCGTCCGAGTAGCCTCGCTC 39508 ||||||||||||||| |||||| || |||||||| || |||| ||||| || ||||| Sbjct 459 CGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTCGGAGTACCCGCGCTC 400 Query 39509 GCGCGCTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCC 39568 || ||| |||||| ||||||||||||| | || | ||| |||||||||||| Sbjct 399 CCGGCAGCCCGCCTGGAACGGCACGAACTCCTTGTCGAGGATCTCCTTCTTCTTCTTGCC 340 Query 39569 CATCGCCCGGCGAAGCAGGTCGGCCTGACCGAGGGTGTACCCGGCCATGACCTGCGCAAC 39628 |||||| || || |||||||||||||| ||||| | ||||||||| | || |||||| | Sbjct 339 CATCGCGCGCCGCAGCAGGTCGGCCTGTCCGAGCGAGTACCCGGCGAGGATCTGCGCGGC 280 Query 39629 CTTCTGCACCTGCTCCTGGTAGATGATGAGCTGGAAGGTCGGGTCCAGGATCTCCGACAG 39688 | |||| |||||||||||||||| |||||| | ||||| ||| |||||||||| || Sbjct 279 CCTCTGGACCTGCTCCTGGTAGACGATGAGGCCGTAGGTCTCGTCGAGGATCTCCGCGAG 220 Query 39689 GG 39690 || Sbjct 219 GG 218 Score = 165 bits (182), Expect = 3e-36 Identities = 147/184 (80%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 39664 AGGTCGGGTCCAGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGATCGGCGTGATCG 39723 ||||| ||| |||||||||| |||| || | | ||| |||||||| ||| |||| Sbjct 186 AGGTCTCGTCGAGGATCTCCGCGAGGGGCTGCTCGAGCTCCGGGTGGATGGGCTCGATCT 127 Query 39724 CCTGCTGCCCGTTCTTACGGAGGGCGTAGTTCGTGTGAGACCCCACGCCCATCGGACCCG 39783 |||| |||||||||| || || |||||||||||||| || || ||||||||| |||| Sbjct 126 TCTGCAGCCCGTTCTTGCGCAGCGCGTAGTTCGTGTGCGAGTTCATGCCCATCGGGCCCG 67 Query 39784 GACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAAGTTGTCCGGCTTCAGCAGACGGA 39843 | ||||||||||||| ||||||||||| ||| ||||| ||||||||||||| | | || | Sbjct 66 GGCGGTACAGCGCGATGACGGCCGAGAGGTCGTCGAACTTGTCCGGCTTCATCTGGCGCA 7 Query 39844 GCAG 39847 | || Sbjct 6 GGAG 3 >seq6680 Length=369 Score = 230 bits (254), Expect = 8e-56 Identities = 267/360 (74%), Gaps = 0/360 (0%) Strand=Plus/Minus Query 39840 CGGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGTCGCCCCTG 39899 || || || | |||||| | |||||||||||||||||| || ||||||||| || | Sbjct 369 CGCAGGAGCGCGCGCATGGGGCCGCCGTCGAGCTGGAACACGCCGAGCGTGTCACCGCGC 310 Query 39900 GCCAGCAGCTCGTACGTCGCGGGGTCGTCCAGGGGGATGTTCTCCAGGTCGACGTGCTCC 39959 || ||||||||||||| ||| |||||| || | || ||| | |||| ||||| Sbjct 309 GCGAGCAGCTCGTACGACGCCTTGTCGTCGAGCGTGAGCGACTCGATCTCGATCGGCTCC 250 Query 39960 CCACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCG 40019 | ||| | ||||||||||| ||||||| | | ||||||||||||||| |||||| Sbjct 249 TTGCCGTTCATCTCGATGTTCTCGAGCGCGTCGTCGAGGATCGTGAGGTTCCGCAGCCCG 190 Query 40020 AGGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCTCGGGTAGTCGAACTGCGTGATC 40079 |||||||||||||| | ||||| || ||||| | |||||||||||||||| ||||| Sbjct 189 AGGAAGTCCATCTTGATGAGGCCGAGGCCCTCGGACGTCGGGTAGTCGAACTGGGTGATG 130 Query 40080 GTCGCGCCGTCCTGCGGTCGCACCCACACCGGGATGTGGTCGACCAGAGGCTCGTCGGAC 40139 |||||||||||| || || | | ||||||| ||||| || || ||| ||| Sbjct 129 ACCGCGCCGTCCTGAGGACGGCGCATGATCGGGATGATGTCGATGAGCGGGTCGCTCGAC 70 Query 40140 ATGATCACACCGGCTGCGTGCACACCCATCTGCCGGACGAGACCTTCGAGACCGAGCGCG 40199 ||||| || || || |||||||| ||| |||||| || || |||| ||| ||||| Sbjct 69 ATGATGACGCCCGCCGCGTGCACGCCCCACTGCCGCTTCAGCCCCTCGATACCCCGCGCG 10 >seq3261 Length=292 Score = 215 bits (238), Expect = 2e-51 Identities = 223/292 (76%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 40340 GGTCAGCTTCTCGCCGACCTGGAAGGGCTTGTCCAGCACGCGGGCTGCGTCCTTCATCGC 40399 ||| |||||||| || | | |||||| | | || | || || | |||||| | ||| Sbjct 292 GGTGAGCTTCTCCCCCATCGCGAAGGGGAAGCCGAGGAGCCGCGCCGAGTCCTTGAGCGC 233 Query 40400 GTTGCGCGCCTTGATCCGTCCGTACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTT 40459 | |||||||| ||||| || ||||||| ||||| |||| | |||||||| Sbjct 232 CTGCTTGGCCTTGATGGTGCCGTAGGTGACGATCTGGGCGACGCGGTCGTCGCCGTACTT 173 Query 40460 CCGGGTGACGTACTGGATCACCTCGCCACGACGCCGGTCATCGAAGTCGATGTCGACATC 40519 | ||||||||| |||| ||||| || || || || || |||||||||| |||||| || Sbjct 172 CTCCGTGACGTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAAGTCGACGTCGACGTC 113 Query 40520 GGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGG 40579 |||||| ||||| ||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct 112 GGGCATCGACACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAGCCCGTGCTCCAGCGG 53 Query 40580 GTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAG 40631 |||||| |||||||| || | || ||||| | ||| || || || || ||| Sbjct 52 GTCGAGCTCGGTGATGCCCATGAGGTAGGAGGCCATGGAGCCCGCGGCCGAG 1 >seq3903 Length=451 Score = 140 bits (154), Expect = 1e-28 Identities = 273/401 (68%), Gaps = 2/401 (0%) Strand=Plus/Plus Query 41091 ACGTAGTGGGAATCGTTCGTGACCACCGGAGTGAGCGC-GAGGTGCTTCCCGAGCCGGTA 41149 ||||||||| |||||||| | || | | | |||| || | || | |||| || Sbjct 5 ACGTAGTGGAGGTCGTTCGTCGCGACGAG-GCGCGCGCCGATGGTCTCCGCGAGGCGCAG 63 Query 41150 CAGATCCTCGCGGACCCGGCGCTCGATCTCGATGCCGTGGTCCATGAGTTCGAGCAGGTA 41209 || |||| |||||| |||||| ||||| |||||||||||||| |||| | | | Sbjct 64 GAGGTCCTTCGTGACCCGCGTCTCGATGTCGATCCCGTGGTCCATGAGCTCGACGAAGAA 123 Query 41210 GCGCTCGCGACCCAGGATCTCCAGCCAGTCGCCAGCGGCCCTGACTGCCTCGTCGTACTG 41269 | |||||| || | ||| ||| | ||||| || | || || |||||||| |||| Sbjct 124 GTTCTCGCGGCCGAAGATGTCCTGGAGCTCGCCCGCCGTCCGCACCGCCTCGTCCCACTG 183 Query 41270 ACCCAGGTTCAGCCTGGTCATGACTTCGCCACCAGGGCACCCCGTGGTTCCGATGATGCC 41329 || ||| ||| | ||| || ||||| |||||||| | || ||| || ||| Sbjct 184 TCCGAGGCGCAGGCGCGTCTGGATCTCGCCCGACGGGCACCCGCTCGTCGCGACGAGGCC 243 Query 41330 CTCGCTGCACTCGGCGACGAGTTCCTTGTCGAGGCGGGCGTACTTGCCCATCAGCCCCTC 41389 || || | || || ||| || ||| | ||| | ||||||||||| ||||||| Sbjct 244 CTTGCCGTACCGCTGGAGGAGGTCGCGGTCCATGCGCGGCCACTTGCCCATCTGCCCCTC 303 Query 41390 CTGGTAGGAGCGAGACGTGATGCGCATGAGGTTGTGAAGGCCCGTCTTGTTCTGCGCGAG 41449 | | | | | |||| || | |||||||| || ||| |||| || |||||| Sbjct 304 GAGCGACGCGAGCGACGACGCCCGGAACAGGTTGTGCAGACCCTCGTTGTCCTTCGCGAG 363 Query 41450 CATGGTCATGTGCGTGTACGCACCGTTACCCGACACGTCGT 41490 || ||||||||||||||||||||| |||| ||||||| Sbjct 364 CAGCGTCATGTGCGTGTACGCACCGCGCGCCGAGACGTCGT 404 >seq4505 Length=425 Score = 98.7 bits (108), Expect = 3e-16 Identities = 199/290 (69%), Gaps = 9/290 (3%) Strand=Plus/Plus Query 40426 TCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGC 40485 |||||| ||||||| | | | |||| || || | ||||| |||||| ||||| Sbjct 39 TCGCGACCTGCGCGGCGTGCGTGCGCCCGAACGTCTCGTAGACGTGCTGGATGACCTCCT 98 Query 40486 CACGACGC-CGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTC 40544 | || ||| | | | |||| ||||||||||| || ||| | ||||||||||| Sbjct 99 CGCGCCGCGCCGAC-TCGATGTCGATGTCGATGTCCGGCGGGCCGTCGCGCTCGGGGGCG 157 Query 40545 AGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACG 40604 ||||| |||||||| | || ||||||| || || ||||| | | ||||| ||||| || Sbjct 158 AGGAAGCGCTCGAACAGCAGGCCGTGCTTCACCGCGTCGACGGCCGTGATGCCGAGCGCG 217 Query 40605 TAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCC 40664 ||| |||| || || || ||||| ||||| || ||| || |||| ||| Sbjct 218 TAGCAGACCGCGGAGTTCGCGGCCGAGCCGCGCCCCTGGGCGA---GGATCCCGT--TCC 272 Query 40665 TTCGCC--CAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAG 40712 | || | | || || ||| ||| |||||||||||| ||||||| Sbjct 273 TGCGGCAGAACTCGACGAGGTCGTAGACCACGAGGAAGTACCCCGGGAAG 322 >seq2881 Length=589 Score = 86.0 bits (94), Expect = 2e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 38825 CTCCAGCCCGGCGAGCGGGTGGTCGGAGACGTACAGGCCCAGCATCTCCCGCTCGATGGA 38884 ||| ||||||| |||||||||||||||||||||||||| |||||||| ||||||| | Sbjct 162 CTCGAGCCCGGACAGCGGGTGGTCGGAGACGTACAGGCCGAGCATCTCGCGCTCGAACGC 103 Query 38885 GAGACGCGGACCCTTCGCCCAGTCC 38909 ||| ||| | ||| |||||||| Sbjct 102 GAGGCGCTGCTTCTTGTCCCAGTCC 78 >seq6084 Length=186 Score = 80.6 bits (88), Expect = 9e-11 Identities = 121/172 (70%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 40195 GCGCGGTGTCGATGACCTCCTTGGCGTCCGGGTCGGAGCCGTAGATGCCCCGGATCTCGG 40254 ||||| |||| ||| || || |||||||||| | ||| || |||| ||| | Sbjct 8 GCGCGAGCTCGACGACGCGCTGCGCCTCCGGGTCGGTGTCGTGGAGCTGACGGAACTCCG 67 Query 40255 CGGCCTCCTCGTACCGAGGGTGCTCGGCGTTGAAGATCCCGTCGAGGGGCATCGAGTTGC 40314 | ||||| |||||| ||||| || || ||||||||| ||||| || |||| Sbjct 68 CCGCCTCGGAGTACCGCTCGTGCTTGGGGTCGAAGATCCCCGACAGGGGGATGTCCTTGC 127 Query 40315 CCATCACGTCGGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGGAAGGG 40366 |||||||| | | ||| ||||||||| |||||||| || | | |||||| Sbjct 128 CCATCACGGCCGGCGGCATCGCCTTGGTGAGCTTCTCCCCCATCGCGAAGGG 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163870178710284