Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04- 25] 7,513 sequences; 13,166,602 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq3663 513 7e-141 >seq3663 Length=1069 Score = 513 bits (568), Expect = 7e-141 Identities = 536/710 (75%), Gaps = 47/710 (7%) Strand=Plus/Minus Query 59276 GGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACCAACAACTTCT 59335 ||||||| || ||||| ||||| || ||||| ||| |||| | | ||||||| Sbjct 1069 GGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCGTCGGGAACTTCT 1010 Query 59336 GGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACGCTGACGGAGG 59395 ||||||| ||||| | || || || |||||||||| | | ||| |||||| || | | Sbjct 1009 GGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACACGCTCACCGCGC 950 Query 59396 AAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGACACGATCCAGG 59455 | ||||| | ||||||||||| || ||||||||||||||| |||| ||||||||||||| Sbjct 949 AGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGGACACGATCCAGG 890 Query 59456 GCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGAGGAGGCGGTGT 59515 |||| || || || ||| || ||||| ||||||||||||||||||||||| ||||||| Sbjct 889 GCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAGGAAGCGGTGT 830 Query 59516 ACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAACATCTTCTCGA 59575 |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 829 ACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCGATCTTCTCGA 770 Query 59576 CGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGGAGAATCCGAACC 59635 |||||||||| | |||||||||| ||||||||||||||||||||||| ||||||| Sbjct 769 CGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGAGAACCCGAACC 710 Query 59636 TGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGACGATCCGCTGAAGCGGA 59695 | || |||||||| |||||||| ||||||||||| |||| ||| ||||| ||||| | Sbjct 709 TCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGCCGCTCAAGCGCA 650 Query 59696 AGGTGGCCTCGACGTTGCTGGAGGGGTTCCTGTTCTACTCGGGCTTC------------- 59742 |||| || ||| |||| ||| ||||| |||||||| |||||| Sbjct 649 AGGTCGCGAGCACGCTGCTCGAGTCATTCCTCTTCTACTCCGGCTTCNNNNNNNNNNNNN 590 Query 59743 ------------------------TACCTGCCGATGTACTGGTCTAGTCGGGGG--AAGC 59776 |||||||||||||||||| |||| | | |||| Sbjct 589 NNNNNNNNNNNNNNNNNNNNNNNNNNCCTGCCGATGTACTGGTC--GTCGCGCGCCAAGC 532 Query 59777 TGACGAACACGGCCGACATGATCCGGCTCATCATTCGTGACGAGGCGGTGCACGGCTACT 59836 ||||||||||||||||| | ||||| |||||||| || |||||||| |||||||| |||| Sbjct 531 TGACGAACACGGCCGACCTCATCCGCCTCATCATCCGCGACGAGGCCGTGCACGGGTACT 472 Query 59837 ACATCGGATACAAGTTCCAGCGCGGCCTGGAGA--CTCAGAAC-GAGGCTCGCCGCGAGG 59893 ||||||| |||||||||||| || || |||| ||| | |||| ||||| | Sbjct 471 ACATCGGCTACAAGTTCCAGAAGGGTCTCGAGAAGCTCTCCCCGGAGG---AGCGCGACG 415 Query 59894 AGCTGAAGGACTACACGTACGGTCTGCTACTCGAGTTGTACGACAACGAG 59943 |||| |||| ||||||| || ||||| ||||| ||||||| |||||| Sbjct 414 AGCTCAAGGCGTACACGTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAG 365 Score = 219 bits (242), Expect = 2e-52 Identities = 193/241 (80%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 59962 CTGTACGACGGCGTGGGACTGACTGAGGATGTCAAGATGTTCCTGCGCTACAACGCCAAC 60021 || ||||||||||| || ||||| ||||| ||||||| ||||||||| |||||||||||| Sbjct 286 CTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGCGGTACAACGCCAAC 227 Query 60022 AAGGCGCTGATGAATCTCGGCTACGAGGCGCTGTTCCCGCGCGACGAAACCGAGGTGAAT 60081 |||||||| ||||| ||||||||||||||||| ||||| ||||| ||||| || || Sbjct 226 AAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTCCCCAAGGACGAGACCGACGTCAAC 167 Query 60082 GCGGCGATCTTGGCGGCACTGTCCCCTGGCGGGGACGAGAACCACGACTTCTTCTCGGGC 60141 |||||||| | |||| ||||| || || ||||||||||||||||||||||| || Sbjct 166 CCGGCGATCCTCTCGGCGCTGTCGCCGAACGCCGACGAGAACCACGACTTCTTCTCCGGG 107 Query 60142 TCTGGCAGCACGTATGTGATTGGCAAGGCTGAGGTTACGGAAGACGAGGATTGGGACTTC 60201 || ||| |||| || || |||||||| | | || || ||||| || ||||||||| Sbjct 106 TCCGGCTCGTCGTACGTCATCGGCAAGGCCGTGAACACCGAGGACGACGACTGGGACTTC 47 Query 60202 T 60202 | Sbjct 46 T 46 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258907491045588