Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04- 25] 7,513 sequences; 13,166,602 total letters Query= NC_021304.1 Length=51552 Score E Sequences producing significant alignments: (Bits) Value seq3505 361 2e-95 seq6680 235 2e-57 seq3261 221 4e-53 seq3903 114 4e-21 seq4505 98.7 3e-16 seq2881 86.0 2e-12 seq6084 80.6 9e-11 >seq3505 Length=1005 Score = 361 bits (400), Expect = 2e-95 Identities = 484/662 (73%), Gaps = 17/662 (3%) Strand=Plus/Minus Query 39324 GAGTCGAACGCACCGGCCTTGATCAAGGACTCGATGGCTCGCTTGCTCACGGTCGCCTGA 39383 |||||||||||||| |||||||| | |||||||||| |||||| | | | || Sbjct 869 GAGTCGAACGCACCTGCCTTGATGAGCGACTCGATGGTGCGCTTGTT---GCACACCACG 813 Query 39384 GTCGCTGCCTTC---AGGAAGTCCGGCAGGGAGGTGAACTTCCCCCAGGCTTCCCGGAGT 39440 | || |||| |||||||| | | || |||||| ||| | || || || Sbjct 812 GCCGGCACCTTGTCGAGGAAGTCGGTGAACGACGTGAACGCGCCCTTCTCCTCGCGC-GT 754 Query 39441 TCGGC-GATCTCCGCGACCATGCCCTCGCCCACGTTCTTCACGGCGGTCAGCCCGAAGCG 39499 ||| |||| | |||| | | | |||| ||||| |||| | || || |||||||| Sbjct 753 GCGGATGATCGCGTCGACGACGTTCGCGCCGACGTTGCGCACGCCCGTGAGGCCGAAGCG 694 Query 39500 GATCTCGT-GCTCCCCGTTGGGGGTGAACGA-GCTGTTCGAGACCGACACGTCGGGCGGC 39557 ||| ||| || | ||| ||||||| || | |||| | |||||| ||||| Sbjct 693 GATGTCGCCGCCCACCGC----GGTGAACTTCGCCGC-CGAGTCGTTCACGTCCGGCGGG 639 Query 39558 AGGACCCGCAGGCCCATGCGCCGAGACTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCG 39617 || || | | ||||||||| ||||| |||||| ||||| ||||| ||||||| Sbjct 638 AGCACGGTGATGTGCATGCGCCGGCACTCGTTGAGGTAGAGGGCCAGCTTGTCCTTGTCG 579 Query 39618 TCGCCCACCGAGGTG-AGCGCAGCCGCCATGTACTCGGCTGGGTAGTGCGTCTTCAGCCA 39676 |||| ||| | || || |||||||||||||| | ||||||| || ||| || | Sbjct 578 TCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGTTCGCCTTGAGGAA 520 Query 39677 CGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCGTAGCC 39736 |||||| | |||||| | ||| |||||| | || |||||||||||||||||||||||||| Sbjct 519 CGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCGTAGCC 460 Query 39737 AGCGAACGGGACCAGCACGTCCCACACTGCCTGGATGGCACCGTCCGAGTAGCCTCGCTC 39796 ||||||||||||||| |||||| || |||||||| || |||| ||||| || ||||| Sbjct 459 CGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTCGGAGTACCCGCGCTC 400 Query 39797 GCGCGCTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCC 39856 || ||| |||||| ||||||||||||| | || | ||| |||||||||||| Sbjct 399 CCGGCAGCCCGCCTGGAACGGCACGAACTCCTTGTCGAGGATCTCCTTCTTCTTCTTGCC 340 Query 39857 CATCGCCCGGCGAAGCAGGTCGGCCTGACCGAGGGTGTACCCGGCCATGACCTGTGCAAC 39916 |||||| || || |||||||||||||| ||||| | ||||||||| | || ||| || | Sbjct 339 CATCGCGCGCCGCAGCAGGTCGGCCTGTCCGAGCGAGTACCCGGCGAGGATCTGCGCGGC 280 Query 39917 CTTCTGCACTTGCTCCTGGTAGATGATGAGCTGGAAGGTCGGGTCCAGGATCTCCGACAG 39976 | |||| || ||||||||||||| |||||| | ||||| ||| |||||||||| || Sbjct 279 CCTCTGGACCTGCTCCTGGTAGACGATGAGGCCGTAGGTCTCGTCGAGGATCTCCGCGAG 220 Query 39977 GG 39978 || Sbjct 219 GG 218 Score = 161 bits (178), Expect = 3e-35 Identities = 146/184 (79%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 39952 AGGTCGGGTCCAGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGATCGGCGTGATCG 40011 ||||| ||| |||||||||| |||| || | | ||| |||||||| ||| |||| Sbjct 186 AGGTCTCGTCGAGGATCTCCGCGAGGGGCTGCTCGAGCTCCGGGTGGATGGGCTCGATCT 127 Query 40012 CCTGCTGCCCGTTCTTCCGGAGGGCGTAGTTCGTGTGAGACCCCACGCCCATCGGACCAG 40071 |||| |||||||||| || || |||||||||||||| || || ||||||||| || | Sbjct 126 TCTGCAGCCCGTTCTTGCGCAGCGCGTAGTTCGTGTGCGAGTTCATGCCCATCGGGCCCG 67 Query 40072 GACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAAGTTGTCCGGCTTCAGCAGACGGA 40131 | ||||||||||||| ||||||||||| ||| ||||| ||||||||||||| | | || | Sbjct 66 GGCGGTACAGCGCGATGACGGCCGAGAGGTCGTCGAACTTGTCCGGCTTCATCTGGCGCA 7 Query 40132 GCAG 40135 | || Sbjct 6 GGAG 3 >seq6680 Length=369 Score = 235 bits (260), Expect = 2e-57 Identities = 268/360 (74%), Gaps = 0/360 (0%) Strand=Plus/Minus Query 40128 CGGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGTCGCCCCTG 40187 || || || | |||||| | |||||||||||||||||| || ||||||||| || | Sbjct 369 CGCAGGAGCGCGCGCATGGGGCCGCCGTCGAGCTGGAACACGCCGAGCGTGTCACCGCGC 310 Query 40188 GCCAGCAGCTCGTACGTCGCGGGGTCGTCCAGGGGGATGTTCTCCAGGTCGACGTGCTCC 40247 || ||||||||||||| ||| |||||| || | || ||| | |||| ||||| Sbjct 309 GCGAGCAGCTCGTACGACGCCTTGTCGTCGAGCGTGAGCGACTCGATCTCGATCGGCTCC 250 Query 40248 CCACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCG 40307 | ||| | ||||||||||| ||||||| | | ||||||||||||||| |||||| Sbjct 249 TTGCCGTTCATCTCGATGTTCTCGAGCGCGTCGTCGAGGATCGTGAGGTTCCGCAGCCCG 190 Query 40308 AGGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCTCGGGTAGTCGAACTGCGTGATC 40367 |||||||||||||| | ||||| || ||||| | |||||||||||||||| ||||| Sbjct 189 AGGAAGTCCATCTTGATGAGGCCGAGGCCCTCGGACGTCGGGTAGTCGAACTGGGTGATG 130 Query 40368 GTCGCGCCGTCCTGCGGCCGAACCCACACCGGGATGTGGTCGACCAGCGGCTCGTCGGAC 40427 |||||||||||| || || | | ||||||| ||||| ||||| ||| ||| Sbjct 129 ACCGCGCCGTCCTGAGGACGGCGCATGATCGGGATGATGTCGATGAGCGGGTCGCTCGAC 70 Query 40428 ATGATCACACCGGCTGCGTGCACACCCATCTGCCGGACGAGACCTTCGAGACCGAGCGCG 40487 ||||| || || || |||||||| ||| |||||| || || |||| ||| ||||| Sbjct 69 ATGATGACGCCCGCCGCGTGCACGCCCCACTGCCGCTTCAGCCCCTCGATACCCCGCGCG 10 >seq3261 Length=292 Score = 221 bits (244), Expect = 4e-53 Identities = 224/292 (77%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 40628 GGTCAGCTTCTCGCCGACCTGGAAGGGCTTGTCCAGCACGCGGGCTGCGTCCTTCATCGC 40687 ||| |||||||| || | | |||||| | | || | || || | |||||| | ||| Sbjct 292 GGTGAGCTTCTCCCCCATCGCGAAGGGGAAGCCGAGGAGCCGCGCCGAGTCCTTGAGCGC 233 Query 40688 GTTGCGCGCCTTGATCCGTCCGTACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTT 40747 | |||||||| ||||| || ||||||| ||||| |||| | |||||||| Sbjct 232 CTGCTTGGCCTTGATGGTGCCGTAGGTGACGATCTGGGCGACGCGGTCGTCGCCGTACTT 173 Query 40748 CCGGGTGACGTACTGGATCACCTCGCCACGACGCCGGTCATCGAAGTCGATGTCGACATC 40807 | ||||||||| |||| ||||| || || || || || |||||||||| |||||| || Sbjct 172 CTCCGTGACGTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAAGTCGACGTCGACGTC 113 Query 40808 GGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGG 40867 |||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 112 GGGCATCGACACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAGCCCGTGCTCCAGCGG 53 Query 40868 GTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAG 40919 |||||| |||||||| || | || ||||| | ||| || || || || ||| Sbjct 52 GTCGAGCTCGGTGATGCCCATGAGGTAGGAGGCCATGGAGCCCGCGGCCGAG 1 >seq3903 Length=451 Score = 114 bits (126), Expect = 4e-21 Identities = 266/392 (68%), Gaps = 12/392 (3%) Strand=Plus/Plus Query 41379 ACGTAGTGGGAATCGTTCGTGACCACCGGAGTGAGCGC-GAGGTGCTTCCCGAGCCGGTA 41437 ||||||||| |||||||| | || | | | |||| || | || | |||| || Sbjct 5 ACGTAGTGGAGGTCGTTCGTCGCGACGAG-GCGCGCGCCGATGGTCTCCGCGAGGCGCAG 63 Query 41438 CAGATCCTCGCGGACCCGGCGCTCGATCTCGATGCCGTGGTCCATCAGCTCCAGGAAGTA 41497 || |||| |||||| |||||| ||||| ||||||||||| ||||| | |||| | Sbjct 64 GAGGTCCTTCGTGACCCGCGTCTCGATGTCGATCCCGTGGTCCATGAGCTCGACGAAGAA 123 Query 41498 CCGGTCACGCCCGAAGACCTCCAGGTAC-CGACCGGCCTCCTTCACGGCCTCGTCGTACT 41556 || || ||||||| ||| || | || ||| | ||| ||| |||||||| ||| Sbjct 124 GTTCTCGCGGCCGAAGATGTCCTGGAGCTCGCCCGCCGTCC-GCACCGCCTCGTCCCACT 182 Query 41557 GCCCGAGGTTCAGCCGGGTCATGATCGCACCGCCAGGACATCCGGTCGTGACGACCAGGC 41616 | |||||| ||| || ||| |||| | || || || ||| |||| |||| |||| Sbjct 183 GTCCGAGGCGCAGGCGCGTCTGGATCTCGCCCGACGGGCACCCGCTCGTCGCGACGAGGC 242 Query 41617 CCTCGTTGTGCTCGGCGACCAGGTCGAAGTCCATGCGCGGGTACTTCCCGAGCAGGCCCT 41676 ||| | || | || |||||| |||||||||||| |||| || | | | |||| Sbjct 243 CCTTGCCGTACCGCTGGAGGAGGTCGCGGTCCATGCGCGGCCACTTGCCCATCTGCCCCT 302 Query 41677 CCTGGTACGACCGCGAGC--TGA--GCTTCATGAGGTTGTGCAGGCCGGTCTTGTTCGTG 41732 | | ||| ||||||| || | | ||||||||||| || |||| | | Sbjct 303 C---GAGCGA-CGCGAGCGACGACGCCCGGAACAGGTTGTGCAGACCCTCGTTGTCCTTC 358 Query 41733 GAGAGGATCGTGAGGTGCGTGTACGCACCCCG 41764 | ||| | ||| | ||||||||||||||| || Sbjct 359 GCGAGCAGCGTCATGTGCGTGTACGCACCGCG 390 >seq4505 Length=425 Score = 98.7 bits (108), Expect = 3e-16 Identities = 199/290 (69%), Gaps = 9/290 (3%) Strand=Plus/Plus Query 40714 TCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGC 40773 |||||| ||||||| | | | |||| || || | ||||| |||||| ||||| Sbjct 39 TCGCGACCTGCGCGGCGTGCGTGCGCCCGAACGTCTCGTAGACGTGCTGGATGACCTCCT 98 Query 40774 CACGACGC-CGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTC 40832 | || ||| | | | |||| ||||||||||| || ||| | ||||||||||| Sbjct 99 CGCGCCGCGCCGAC-TCGATGTCGATGTCGATGTCCGGCGGGCCGTCGCGCTCGGGGGCG 157 Query 40833 AGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACG 40892 ||||| |||||||| | || ||||||| || || ||||| | | ||||| ||||| || Sbjct 158 AGGAAGCGCTCGAACAGCAGGCCGTGCTTCACCGCGTCGACGGCCGTGATGCCGAGCGCG 217 Query 40893 TAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCC 40952 ||| |||| || || || ||||| ||||| || ||| || |||| ||| Sbjct 218 TAGCAGACCGCGGAGTTCGCGGCCGAGCCGCGCCCCTGGGCGA---GGATCCCGT--TCC 272 Query 40953 TTCGCC--CAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAG 41000 | || | | || || ||| ||| |||||||||||| ||||||| Sbjct 273 TGCGGCAGAACTCGACGAGGTCGTAGACCACGAGGAAGTACCCCGGGAAG 322 >seq2881 Length=589 Score = 86.0 bits (94), Expect = 2e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 39113 CTCCAGCCCGGCGAGCGGGTGGTCGGAGACGTACAGGCCCAGCATCTCCCGCTCGATGGA 39172 ||| ||||||| |||||||||||||||||||||||||| |||||||| ||||||| | Sbjct 162 CTCGAGCCCGGACAGCGGGTGGTCGGAGACGTACAGGCCGAGCATCTCGCGCTCGAACGC 103 Query 39173 GAGACGCGGACCCTTCGCCCAGTCC 39197 ||| ||| | ||| |||||||| Sbjct 102 GAGGCGCTGCTTCTTGTCCCAGTCC 78 >seq6084 Length=186 Score = 80.6 bits (88), Expect = 9e-11 Identities = 121/172 (70%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 40483 GCGCGGTGTCGATGACCTCCTTGGCGTCCGGGTCGGAGCCGTAGATGCCCCGGATCTCGG 40542 ||||| |||| ||| || || |||||||||| | ||| || |||| ||| | Sbjct 8 GCGCGAGCTCGACGACGCGCTGCGCCTCCGGGTCGGTGTCGTGGAGCTGACGGAACTCCG 67 Query 40543 CGGCCTCCTCGTACCGAGGGTGCTCGGCGTTGAAGATCCCGTCGAGGGGCATCGAGTTGC 40602 | ||||| |||||| ||||| || || ||||||||| ||||| || |||| Sbjct 68 CCGCCTCGGAGTACCGCTCGTGCTTGGGGTCGAAGATCCCCGACAGGGGGATGTCCTTGC 127 Query 40603 CCATCACGTCGGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGGAAGGG 40654 |||||||| | | ||| ||||||||| |||||||| || | | |||||| Sbjct 128 CCATCACGGCCGGCGGCATCGCCTTGGTGAGCTTCTCCCCCATCGCGAAGGG 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164830093062084