Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04-
25] 7,513 sequences; 13,166,602 total letters
Query= NC_021339.1
Length=51077
Score E
Sequences producing significant alignments: (Bits) Value
seq3505 338 2e-88
seq3261 230 8e-56
seq6680 221 4e-53
seq4505 111 5e-20
seq2881 100 9e-17
seq3903 93.3 1e-14
>seq3505
Length=1005
Score = 338 bits (374), Expect = 2e-88
Identities = 480/662 (73%), Gaps = 15/662 (2%)
Strand=Plus/Minus
Query 38783 CGAGTCGAAGGCACCGGCCTTGATCAGGGACTCGATGGCTCGCTTGCT-CAC-CGTCGCC 38840
||||||||| ||||| |||||||| || |||||||||| |||||| | ||| | || |
Sbjct 870 CGAGTCGAACGCACCTGCCTTGATGAGCGACTCGATGGTGCGCTTGTTGCACACCACGGC 811
Query 38841 TGAGTCGCTGCCTTCAGGAAGTCCGGCAGGGAGGTGAACTTCCCCCAGGCTTCCCGGAGT 38900
| | || | |||||||| | | || |||||| ||| | || || ||
Sbjct 810 CGGCACCTTGTCG--AGGAAGTCGGTGAACGACGTGAACGCGCCCTTCTCCTCGCGC-GT 754
Query 38901 TCAGC-GATCTCCGCGACCATGCCCTCGCCCACGTTCTTCACGGCGGTCAGTCCGAAGCG 38959
| | |||| | |||| | | | |||| ||||| |||| | || || ||||||||
Sbjct 753 GCGGATGATCGCGTCGACGACGTTCGCGCCGACGTTGCGCACGCCCGTGAGGCCGAAGCG 694
Query 38960 GATCTCGT-GCTCCCCGTTGGGGGTGAACGA-GCTGTTCGAGACCGACACGTCGGGCGGC 39017
||| ||| || | ||| ||||||| || | |||| | |||||| |||||
Sbjct 693 GATGTCGCCGCCCACCGC----GGTGAACTTCGCCGC-CGAGTCGTTCACGTCCGGCGGG 639
Query 39018 AGGACCCGAAGGCCCATGCGCCGTGCCTCGCCGAGGTACGTGGCCATCTTGTTCTTGTCG 39077
|| || | | ||||||||| |||| |||||| ||||| ||||| |||||||
Sbjct 638 AGCACGGTGATGTGCATGCGCCGGCACTCGTTGAGGTAGAGGGCCAGCTTGTCCTTGTCG 579
Query 39078 TCGCCCACCGAGGTG-AGCGCAGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAACCA 39136
|||| ||| | || || |||||||||||||| | |||||||| || ||| | |
Sbjct 578 TCGCGCAC-GCTCTGCAGGAGCGCCGCCATGTACTCCGTCGGGTAGTTCGCCTTGAGGAA 520
Query 39137 CGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCGTAGCC 39196
|||||| | |||||| | ||| |||||| | || ||||||||||||||||||||||||||
Sbjct 519 CGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCGTAGCC 460
Query 39197 AGCGAAGGGGACCAGCACGTCCCACACTGCCTGGATGGCACCGTCCGAGTAGCCTCGCTC 39256
||||| ||||||||| |||||| || |||||||| || |||| ||||| || |||||
Sbjct 459 CGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTCGGAGTACCCGCGCTC 400
Query 39257 GCGCGCTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCC 39316
|| ||| |||||| ||||||||||||| | || | ||| ||||||||||||
Sbjct 399 CCGGCAGCCCGCCTGGAACGGCACGAACTCCTTGTCGAGGATCTCCTTCTTCTTCTTGCC 340
Query 39317 CATCGCCCGGCGAAGCAGGTCGGCCTGACCCAGGGTGTACCCGGCCATGACCTGTGCAAC 39376
|||||| || || |||||||||||||| || || | ||||||||| | || ||| || |
Sbjct 339 CATCGCGCGCCGCAGCAGGTCGGCCTGTCCGAGCGAGTACCCGGCGAGGATCTGCGCGGC 280
Query 39377 CTTCTGCACCTGCTCCTGGTAGATGATCAACTGGAATGTCGGGTCCAGGATCTCCGACAG 39436
| |||| |||||||||||||||| ||| | | | ||| ||| |||||||||| ||
Sbjct 279 CCTCTGGACCTGCTCCTGGTAGACGATGAGGCCGTAGGTCTCGTCGAGGATCTCCGCGAG 220
Query 39437 GG 39438
||
Sbjct 219 GG 218
Score = 161 bits (178), Expect = 3e-35
Identities = 142/177 (80%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 39419 GTCCAGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGATCGGCGTGATCGCCTGCTG 39478
||| |||||||||| |||| || | | ||| |||||||| ||| |||| |||| |
Sbjct 179 GTCGAGGATCTCCGCGAGGGGCTGCTCGAGCTCCGGGTGGATGGGCTCGATCTTCTGCAG 120
Query 39479 CCCGTTCTTCCGGAGGGCGTAGTTCGTGTGAGACCCCACGCCCATCGGACCCGGACGGTA 39538
||||||||| || || |||||||||||||| || || ||||||||| ||||| |||||
Sbjct 119 CCCGTTCTTGCGCAGCGCGTAGTTCGTGTGCGAGTTCATGCCCATCGGGCCCGGGCGGTA 60
Query 39539 CAGCGCGACGACGGCTGAGATGTCCTCGAAGTTGTCCGGCTTCAGCAGGCGGAGCAG 39595
|||||||| |||||| |||| ||| ||||| ||||||||||||| | |||| || ||
Sbjct 59 CAGCGCGATGACGGCCGAGAGGTCGTCGAACTTGTCCGGCTTCATCTGGCGCAGGAG 3
>seq3261
Length=292
Score = 230 bits (254), Expect = 8e-56
Identities = 226/292 (77%), Gaps = 0/292 (0%)
Strand=Plus/Minus
Query 40088 GGTCAGCTTCTCGCCGACCTGGAAGGGCTTGTCGAGCACGCGAGCCGCGTCCTTCATCGC 40147
||| |||||||| || | | |||||| | |||| | || |||| |||||| | |||
Sbjct 292 GGTGAGCTTCTCCCCCATCGCGAAGGGGAAGCCGAGGAGCCGCGCCGAGTCCTTGAGCGC 233
Query 40148 GTTGCGCGCCTTGATCCGTCCGTACGTCGCGATCTGCGCGACCTTGTCGGCCCCGTACTT 40207
| |||||||| ||||| || ||||||| ||||| |||| | ||||||||
Sbjct 232 CTGCTTGGCCTTGATGGTGCCGTAGGTGACGATCTGGGCGACGCGGTCGTCGCCGTACTT 173
Query 40208 CCGGGTGACGTACTGGATGACCTCGCCACGACGCCGGTCATCGAAGTCGATGTCGACATC 40267
| ||||||||| |||||||||| || || || || || |||||||||| |||||| ||
Sbjct 172 CTCCGTGACGTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAAGTCGACGTCGACGTC 113
Query 40268 GGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGG 40327
|||||| ||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||
Sbjct 112 GGGCATCGACACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAGCCCGTGCTCCAGCGG 53
Query 40328 GTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAG 40379
|||||| |||||||| || | || ||||| | ||| || || || || |||
Sbjct 52 GTCGAGCTCGGTGATGCCCATGAGGTAGGAGGCCATGGAGCCCGCGGCCGAG 1
>seq6680
Length=369
Score = 221 bits (244), Expect = 4e-53
Identities = 265/360 (74%), Gaps = 0/360 (0%)
Strand=Plus/Minus
Query 39588 CGGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGTCGCCCCTG 39647
|| || || | |||||| | |||||||||||||||||| || ||||||||| || |
Sbjct 369 CGCAGGAGCGCGCGCATGGGGCCGCCGTCGAGCTGGAACACGCCGAGCGTGTCACCGCGC 310
Query 39648 GCCAGCAGCTCGTAGGTCGGGGCGTCGTCCAGAGGGATGTTCTCCAGGTCGACGTGCTCC 39707
|| ||||||||||| | || |||||| || | || ||| | |||| |||||
Sbjct 309 GCGAGCAGCTCGTACGACGCCTTGTCGTCGAGCGTGAGCGACTCGATCTCGATCGGCTCC 250
Query 39708 CCACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCG 39767
| ||| | ||||||||||| ||||||| | | ||||||||||||||| ||||||
Sbjct 249 TTGCCGTTCATCTCGATGTTCTCGAGCGCGTCGTCGAGGATCGTGAGGTTCCGCAGCCCG 190
Query 39768 AGGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCTCGGGTAGTCGAACTGCGTGATC 39827
|||||||||||||| | ||||| || ||||| | |||||||||||||||| |||||
Sbjct 189 AGGAAGTCCATCTTGATGAGGCCGAGGCCCTCGGACGTCGGGTAGTCGAACTGGGTGATG 130
Query 39828 GTCGCGCCGTCCTGCGGCCGAACCCACACCGGGATGTGGTCGACCAGAGGCTCGTCGGAC 39887
|||||||||||| || || | | ||||||| ||||| || || ||| |||
Sbjct 129 ACCGCGCCGTCCTGAGGACGGCGCATGATCGGGATGATGTCGATGAGCGGGTCGCTCGAC 70
Query 39888 ATGATCACACCGGCTGCGTGCACACCCATCTGCCGGACGAGACCTTCGAGACCGAGCGCG 39947
||||| || || || |||||||| ||| |||||| || || |||| ||| |||||
Sbjct 69 ATGATGACGCCCGCCGCGTGCACGCCCCACTGCCGCTTCAGCCCCTCGATACCCCGCGCG 10
>seq4505
Length=425
Score = 111 bits (122), Expect = 5e-20
Identities = 201/289 (70%), Gaps = 9/289 (3%)
Strand=Plus/Plus
Query 40174 TCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATGACCTCGC 40233
|||||| ||||||| | | | |||| || || | ||||| ||||||||||||
Sbjct 39 TCGCGACCTGCGCGGCGTGCGTGCGCCCGAACGTCTCGTAGACGTGCTGGATGACCTCCT 98
Query 40234 CACGACGC-CGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTC 40292
| || ||| | | | |||| ||||||||||| || ||| | |||||||||||
Sbjct 99 CGCGCCGCGCCGAC-TCGATGTCGATGTCGATGTCCGGCGGGCCGTCGCGCTCGGGGGCG 157
Query 40293 AGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACG 40352
|||||||||||||| | || ||||||| || || ||||| | | ||||| ||||| ||
Sbjct 158 AGGAAGCGCTCGAACAGCAGGCCGTGCTTCACCGCGTCGACGGCCGTGATGCCGAGCGCG 217
Query 40353 TAGGCGACCAGCGAACCGGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCC 40412
||| |||| || || || ||||| ||||| || ||| || ||||| |||
Sbjct 218 TAGCAGACCGCGGAGTTCGCGGCCGAGCCGCGCCCCTGGGCGA---GGATCCCGT--TCC 272
Query 40413 TTCGCC--CAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAA 40459
| || | | || || ||| ||| |||||||||||| ||||||
Sbjct 273 TGCGGCAGAACTCGACGAGGTCGTAGACCACGAGGAAGTACCCCGGGAA 321
>seq2881
Length=589
Score = 100 bits (110), Expect = 9e-17
Identities = 73/85 (86%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 38573 CTCCAGCCCGGCGAGCGGGTGGTCGGAGACGTACAGGCCCAGCATCTCGCGCTCGATGGC 38632
||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 162 CTCGAGCCCGGACAGCGGGTGGTCGGAGACGTACAGGCCGAGCATCTCGCGCTCGAACGC 103
Query 38633 GAGGCGCGGACCCTTGCTCCAGTCC 38657
||||||| | |||| |||||||
Sbjct 102 GAGGCGCTGCTTCTTGTCCCAGTCC 78
>seq3903
Length=451
Score = 93.3 bits (102), Expect = 1e-14
Identities = 265/403 (66%), Gaps = 6/403 (1%)
Strand=Plus/Plus
Query 40839 ACGTAGTGGGAATCGTTCGTGACCACCGGAGTGAGCGC-GAGGTGCTTCCCGAGCCGGTA 40897
||||||||| |||||||| | || | | | |||| || | || | |||| ||
Sbjct 5 ACGTAGTGGAGGTCGTTCGTCGCGACGAG-GCGCGCGCCGATGGTCTCCGCGAGGCGCAG 63
Query 40898 CAGGTCGTCACGGACCCGGCGCTCGATCTCGATGTCGTGGTCCATGAGTTCGAGCAGGTA 40957
||||| | |||||| |||||| ||||| ||||||||||||| |||| | | |
Sbjct 64 GAGGTCCTTCGTGACCCGCGTCTCGATGTCGATCCCGTGGTCCATGAGCTCGACGAAGAA 123
Query 40958 CCGGTCACGCCCGAAGACCTCCAGGTACCGACCAGCCTCCTTCACGGCCTCGTCGTACTG 41017
|| || ||||||| ||| || | || ||| | ||| |||||||| ||||
Sbjct 124 GTTCTCGCGGCCGAAGATGTCCTGGAGCTCGCCCGCCGTCCGCACCGCCTCGTCCCACTG 183
Query 41018 CCCGAGGTTGAGCCGGGTCATGATCGCACCGCCAGGGCAGCCAGTCGTGACGACCAGGCC 41077
|||||| || || ||| |||| | || ||||| || |||| |||| |||||
Sbjct 184 TCCGAGGCGCAGGCGCGTCTGGATCTCGCCCGACGGGCACCCGCTCGTCGCGACGAGGCC 243
Query 41078 CTCGTTGTGCTCGGCGACCAGCTCGAAGTCCATGCGCGGGTACTTCCCGAGCAGGCCCTC 41137
|| | || | || || ||| |||||||||||| |||| || | | | |||||
Sbjct 244 CTTGCCGTACCGCTGGAGGAGGTCGCGGTCCATGCGCGGCCACTTGCCCATCTGCCCCTC 303
Query 41138 CTGGTACGACCGAGAGCTGA--GCTTCATGAGGTTGTGGAGCCCGGTCTTGTTCGTGGAG 41195
| ||| |||| | || | | |||||||| || || |||| | | | |
Sbjct 304 GAGCGACG--CGAGCGACGACGCCCGGAACAGGTTGTGCAGACCCTCGTTGTCCTTCGCG 361
Query 41196 AGGATCGTGAGGTGCGTGTACGCGCCGTTGCCCGACACGTCGT 41238
|| | ||| | |||||||||||| ||| |||| |||||||
Sbjct 362 AGCAGCGTCATGTGCGTGTACGCACCGCGCGCCGAGACGTCGT 404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163310228671734
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