Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04- 25] 7,513 sequences; 13,166,602 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq4988 253 1e-62 seq4563 127 1e-24 seq4010 122 4e-23 seq4533 120 2e-22 seq4583 111 8e-20 >seq4988 Length=476 Score = 253 bits (280), Expect = 1e-62 Identities = 344/478 (72%), Gaps = 9/478 (2%) Strand=Plus/Plus Query 67726 CATCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGA 67785 |||||||||||| || | |||||||| ||||||||| | |||||| || || ||| Sbjct 5 CATCGACGCCGAGCACGCACTCGACCCGGAGTACGCCAAGAAGCTCGGCGTCGACACCGA 64 Query 67786 CAATCTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCT 67845 | || | || ||||| ||||| || |||||||| || |||||| ||| | || Sbjct 65 CGCCCTGCTCGTCTCCCAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCT 124 Query 67846 CGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCG 67905 || || |||| | | ||||||||| | ||||| || |||||||| ||||| Sbjct 125 GATCCGCTCGGGCGCGCTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAA 184 Query 67906 GGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTC 67965 ||||||| |||| || || || || ||| |||||||| || || |||||||| ||||| Sbjct 185 GGCGGAGATCGAGGGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTC 244 Query 67966 TCAGGCCATGCGCAAGCTGACCGGCACGATTGCCAGC---ACCAACACGCTCACCCTGTG 68022 ||||| |||||||| | ||||| || | |||| || |||| | || | | Sbjct 245 GCAGGCGCTGCGCAAGATCACCGGTGCGCT---CAGCGCGTCCGGCACGACCGCCATCTT 301 Query 68023 GGTGAATCAGCTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCAC 68082 | || ||||| |||||||||||||| |||| || |||| | ||||| || || Sbjct 302 CATCAACCAGCTCCGCGAGAAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGAC 358 Query 68083 CGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCAC 68142 |||||| ||||| ||| |||||||||||||| ||| | || ||||| | |||| || Sbjct 359 CGGTGGCAAGGCGCTGAAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGAC 418 Query 68143 CGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAAC 68200 | ||||| ||| || || ||||||||||| || ||||||||||| ||||||||| Sbjct 419 CCTCAAGGAGGGCACCGACGCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAAC 476 >seq4563 Length=284 Score = 127 bits (140), Expect = 1e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 68162 GCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGC 68221 || ||||||||||| || ||||||||||| |||||||||||| ||||||| ||| | Sbjct 282 GCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAACAAGATGGCGCCGCCGTTCAAG 223 Query 68222 CAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCCGAACTCCTCGAC 68281 ||||| ||||| |||| ||||||| | ||||| |||||||||| | ||| ||||| Sbjct 222 CAGGCCGAGTTCGACATCCTCTACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCATCGAC 163 Query 68282 ATGGCCGTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAG 68341 |||| ||| | ||| || | ||||| ||| | ||||||| ||||| | | | Sbjct 162 ATGGGCGTGGAGCACGGGTTCGTGCGCAAGTCCGGGTCGTGGTTCACCTACGGCGGCGAC 103 Query 68342 AACATCGGCCAGGGCAAG 68359 | |||| ||||||||| Sbjct 102 CAGCTCGGGCAGGGCAAG 85 >seq4010 Length=1045 Score = 122 bits (134), Expect = 4e-23 Identities = 148/198 (75%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 50935 CCACCCCAGGACCTAGCCGCCGAG-TCAGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAA 50993 || ||||||||| | ||||||||| | ||| || ||||||| |||||| || || ||| | Sbjct 538 CCGCCCCAGGACGTCGCCGCCGAGATGAGC-GTGCTCGGCGGCATGCTGCTGTCGAAGGA 480 Query 50994 CGCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 51050 ||||| | ||| |||||| ||| || | | |||| |||||||||||| || Sbjct 479 CGCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCA 423 Query 51051 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCAT 51110 || | ||||||| || |||| |||||||||| ||| ||| ||||||||| || Sbjct 422 CGAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGAT 363 Query 51111 CACCGTCGCCGCGGAGCT 51128 |||||||| ||||||||| Sbjct 362 CACCGTCGTCGCGGAGCT 345 >seq4533 Length=301 Score = 120 bits (132), Expect = 2e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 67567 CATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGG 67626 ||| ||||| ||||| || || |||||| ||| ||||||||||| || ||| | || Sbjct 191 CATCCCCACGGGCTCCATCGCGCTGGACATCGCGCTCGGCATCGGCGGCCTGCCGCGCGG 132 Query 67627 CCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGC 67686 || || | ||| | ||||| || ||||| || || ||| | || || |||||||| Sbjct 131 GCGCGTCATCGAGGTGTACGGCCCGGAGTCCTCCGGAAAGACGACCGTGGCGCTCCACGC 72 Query 67687 GGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCT 67746 ||||||| |||||| ||||| |||| ||| || | |||||||||||| || | || Sbjct 71 CGTGGCCAGCGCCCAGCGCGCCGGCGGCATCGCGGCGTTCATCGACGCCGAGCACGCACT 12 Query 67747 CGACCCTGAGT 67757 |||||| |||| Sbjct 11 CGACCCGGAGT 1 >seq4583 Length=233 Score = 111 bits (122), Expect = 8e-20 Identities = 157/220 (71%), Gaps = 13/220 (6%) Strand=Plus/Minus Query 61008 GGCCGTCGCCAACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGC 61062 ||| || ||||||||||| || | ||||| |||||| | |||| |||| Sbjct 215 GGCGGTGGCCAACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCG 161 Query 61063 AAC---TGGGTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCC 61119 ||| ||| ||||| ||| || ||| | |||||| | ||||||||||| ||||| Sbjct 160 AACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCG 101 Query 61120 GAGAACGTAGCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAG 61179 |||||||| ||||| || ||| ||| ||||||||||||||| ||| |||| Sbjct 100 GAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTC 41 Query 61180 CAGCGCTCCTTCGAGACCAAGGAAGGCGACAAGCGCACCG 61219 |||||||| | ||||||| || || || |||||||||| Sbjct 40 CAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247426942354704