Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04- 25] 7,513 sequences; 13,166,602 total letters Query= NC_022976.1 Length=75894 Score E Sequences producing significant alignments: (Bits) Value seq4988 288 5e-73 seq4010 122 4e-23 seq4563 118 5e-22 seq4583 111 8e-20 >seq4988 Length=476 Score = 288 bits (318), Expect = 5e-73 Identities = 349/475 (73%), Gaps = 3/475 (1%) Strand=Plus/Plus Query 66246 CATCGACGCTGAGCACTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGA 66305 ||||||||| |||||| | || ||||| |||||||||||| |||||| || ||| ||| Sbjct 5 CATCGACGCCGAGCACGCACTCGACCCGGAGTACGCCAAGAAGCTCGGCGTCGACACCGA 64 Query 66306 CAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCT 66365 | ||| | || ||||||||||| || |||||||| || |||||| ||| | || Sbjct 65 CGCCCTGCTCGTCTCCCAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCT 124 Query 66366 CGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCG 66425 || || |||| ||| |||| ||||| | ||||| || |||||||| ||||| Sbjct 125 GATCCGCTCGGGCGCGCTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAA 184 Query 66426 CGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTC 66485 || ||| |||| ||||| || || ||||| |||||||| || || || ||||||||||| Sbjct 185 GGCGGAGATCGAGGGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTC 244 Query 66486 GCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGT 66545 |||||| |||||||| ||||||| | || | || |||| | ||| | Sbjct 245 GCAGGCGCTGCGCAAGATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCAT 304 Query 66546 CAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGG 66605 ||||||| | |||||||||||||| |||| || |||| | ||||| || || || Sbjct 305 CAACCAGCTCCGCGAGAAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGG 361 Query 66606 CGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGA 66665 || ||||| ||| |||||||||||| ||||| | || |||| ||||||| ||| Sbjct 362 TGGCAAGGCGCTGAAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCT 421 Query 66666 GAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAAC 66720 ||||| ||| || || ||||||||||| ||||| ||||| |||||||||||| Sbjct 422 CAAGGAGGGCACCGACGCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAAC 476 >seq4010 Length=1045 Score = 122 bits (134), Expect = 4e-23 Identities = 148/198 (75%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 50520 CCACCCCAGGACCTAGCCGCCGAG-TCAGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAA 50578 || ||||||||| | ||||||||| | ||| || ||||||| |||||| || || ||| | Sbjct 538 CCGCCCCAGGACGTCGCCGCCGAGATGAGC-GTGCTCGGCGGCATGCTGCTGTCGAAGGA 480 Query 50579 CGCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 50635 ||||| | ||| |||||| ||| || | | |||| |||||||||||| || Sbjct 479 CGCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCA 423 Query 50636 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCAT 50695 || | ||||||| || |||| |||||||||| ||| ||| ||||||||| || Sbjct 422 CGAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGAT 363 Query 50696 CACCGTCGCCGCGGAGCT 50713 |||||||| ||||||||| Sbjct 362 CACCGTCGTCGCGGAGCT 345 >seq4563 Length=284 Score = 118 bits (130), Expect = 5e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 66682 GCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGC 66741 || ||||||||||| ||||| ||||| ||||||||||||||| |||| |||||| | Sbjct 282 GCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAACAAGATGGCGCCGCCGTTCAAG 223 Query 66742 AACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGAC 66801 | ||||||||| | || | ||||||| |||||||| || |||| | ||| ||||| Sbjct 222 CAGGCCGAGTTCGACATCCTCTACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCATCGAC 163 Query 66802 CTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAG 66861 ||| |||| ||| || | ||| ||||| || | ||||||| ||||| | | | Sbjct 162 ATGGGCGTGGAGCACGGGTTCGTGCGCAAGTCCGGGTCGTGGTTCACCTACGGCGGCGAC 103 Query 66862 AACGTCGCCCAGGGCAAG 66879 | ||| ||||||||| Sbjct 102 CAGCTCGGGCAGGGCAAG 85 >seq4583 Length=233 Score = 111 bits (122), Expect = 8e-20 Identities = 157/220 (71%), Gaps = 13/220 (6%) Strand=Plus/Minus Query 60387 GGCCGTCGCCAACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGC 60441 ||| || ||||||||||| || | ||||| |||||| | |||| |||| Sbjct 215 GGCGGTGGCCAACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCG 161 Query 60442 AAC---TGGGTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCC 60498 ||| ||| ||||| ||| || ||| | |||||| | ||||||||||| ||||| Sbjct 160 AACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCG 101 Query 60499 GAGAACGTGGCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAG 60558 |||||||| ||||| || ||| ||| ||||||||||||||| ||| |||| Sbjct 100 GAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTC 41 Query 60559 CAGCGCTCCTTCGAGACCAAGGAAGGCGACAAGCGCACCG 60598 |||||||| | ||||||| || || || |||||||||| Sbjct 40 CAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242713773954015