Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04- 25] 7,513 sequences; 13,166,602 total letters Query= NC_022981.1 Length=76323 Score E Sequences producing significant alignments: (Bits) Value seq4988 297 9e-76 seq4563 123 1e-23 seq4583 120 1e-22 seq4010 118 5e-22 >seq4988 Length=476 Score = 297 bits (328), Expect = 9e-76 Identities = 351/475 (74%), Gaps = 3/475 (1%) Strand=Plus/Plus Query 66502 CATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGA 66561 ||||||||| |||||| | || ||||| |||||||||||| |||||| || ||| ||| Sbjct 5 CATCGACGCCGAGCACGCACTCGACCCGGAGTACGCCAAGAAGCTCGGCGTCGACACCGA 64 Query 66562 CAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCT 66621 | ||| | || ||||||||||| || |||||||| || |||||| ||| | || Sbjct 65 CGCCCTGCTCGTCTCCCAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCT 124 Query 66622 CGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCG 66681 || || |||| ||| |||| ||||| | ||||| || |||||||| ||||| Sbjct 125 GATCCGCTCGGGCGCGCTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAA 184 Query 66682 CGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTC 66741 || ||| |||| ||||| || || ||||| |||||||| || || || ||||||||||| Sbjct 185 GGCGGAGATCGAGGGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTC 244 Query 66742 GCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGT 66801 |||||| |||||||| ||||||| | || | || |||| | ||| | Sbjct 245 GCAGGCGCTGCGCAAGATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCAT 304 Query 66802 CAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGG 66861 ||||||| | |||||||||||||| |||| || |||| | ||||| || || || Sbjct 305 CAACCAGCTCCGCGAGAAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGG 361 Query 66862 CGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGA 66921 |||||||| ||| |||||||||||| ||||| | || |||| ||||||| ||| Sbjct 362 TGGCAAGGCGCTGAAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCT 421 Query 66922 GAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAAC 66976 ||||| ||| || || ||||||||||| ||||| |||||||||||||||||| Sbjct 422 CAAGGAGGGCACCGACGCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAAC 476 >seq4563 Length=284 Score = 123 bits (136), Expect = 1e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 66938 GCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGC 66997 || ||||||||||| ||||| ||||||||||||||||||||| |||| |||||| | Sbjct 282 GCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAACAAGATGGCGCCGCCGTTCAAG 223 Query 66998 AACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGAC 67057 | ||||||||| | || | ||||||| |||||||| || |||| | ||| ||||| Sbjct 222 CAGGCCGAGTTCGACATCCTCTACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCATCGAC 163 Query 67058 CTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAG 67117 ||| |||| ||| || | ||| ||||| || | ||||||| ||||| | | | Sbjct 162 ATGGGCGTGGAGCACGGGTTCGTGCGCAAGTCCGGGTCGTGGTTCACCTACGGCGGCGAC 103 Query 67118 AACGTCGCCCAGGGCAAG 67135 | ||| ||||||||| Sbjct 102 CAGCTCGGGCAGGGCAAG 85 >seq4583 Length=233 Score = 120 bits (132), Expect = 1e-22 Identities = 159/220 (72%), Gaps = 13/220 (6%) Strand=Plus/Minus Query 60643 GGCCGTCGCCAACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGC 60697 ||| || ||||||||||| || | ||||| |||||| | |||| |||| Sbjct 215 GGCGGTGGCCAACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCG 161 Query 60698 AAC---TGGGTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCC 60754 ||| ||| ||||| ||| || ||| | |||||| | ||||||||||| ||||| Sbjct 160 AACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCG 101 Query 60755 GAGAACGTAGCGGAAAGCCTCCAGAAGGGCCAGCGCGTCATCGTGCATGGCTACCTCAAG 60814 |||||||| ||||| || ||||||| ||||||||||||||| ||| |||| Sbjct 100 GAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTC 41 Query 60815 CAGCGCTCCTTCGAGACCAGGGAAGGCGACAAGCGCACCG 60854 |||||||| | ||||||| | || || || |||||||||| Sbjct 40 CAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCG 1 >seq4010 Length=1045 Score = 118 bits (130), Expect = 5e-22 Identities = 145/197 (74%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 50959 CCACCCCAGGACCTAGCCGCCGAGTCGGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAAC 51018 || ||||||||| | ||||||||| | || ||||||| |||||| || || ||| || Sbjct 538 CCGCCCCAGGACGTCGCCGCCGAGATGAGCGTGCTCGGCGGCATGCTGCTGTCGAAGGAC 479 Query 51019 GCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCAC 51075 |||| | ||| |||||| ||| || | | |||| |||||||||||| ||| Sbjct 478 GCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCAC 422 Query 51076 GCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCATC 51135 | | ||||||| || |||| |||||||||| ||| ||| ||||||||| ||| Sbjct 421 GAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGATC 362 Query 51136 ACCGTCGCCGCGGAGCT 51152 ||||||| ||||||||| Sbjct 361 ACCGTCGTCGCGGAGCT 345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244086448254012