Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04- 25] 7,513 sequences; 13,166,602 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2656 95.1 1e-14 seq2086 84.2 2e-11 >seq2656 Length=11485 Score = 95.1 bits (104), Expect = 1e-14 Identities = 117/158 (74%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 25259 AAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAA 25318 |||||| || || || ||||| || || || ||||||||| | |||| | ||| || Sbjct 11430 AAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATTTTTGCCGGTAAG 11371 Query 25319 CAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAAAAGAATCCACCATTC 25376 ||||| ||||||| ||||| |||| | | |||||||||||||| || ||||| ||| Sbjct 11370 CAACTAGAAGATGGTAGAACGCTGTCGG--ACTACAATATTCAAAAGGAGTCCACTCTTC 11313 Query 25377 ATTTAGTGTTAAGATTGAGAGGAGGAAAATGATCATTC 25414 | | || || || ||||| || || || |||||| || Sbjct 11312 ACCTTGTCTTGAGGTTGAGGGGTGGTAACTGATCAGTC 11275 >seq2086 Length=17289 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| |||||| | || || || || |||||||| || | || || | ||||| ||| | Sbjct 8823 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 8764 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 || ||||| || | || || || || || || || ||||| || || || Sbjct 8763 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 8704 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 || |||||| | || | | || || ||| | ||||||| ||||| | | ||| || Sbjct 8703 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 8644 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||| || ||||| ||||| || | || || || || ||||||||||| || Sbjct 8643 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 8593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445052600072160