Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04- 25] 7,513 sequences; 13,166,602 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq885 188 9e-43 >seq885 Length=7641 Score = 188 bits (208), Expect = 9e-43 Identities = 828/1300 (64%), Gaps = 34/1300 (3%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || ||||||| ||| ||| || || || ||||| | |||||| ||||||| |||||| Sbjct 4884 TACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGAT 4943 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATG-CGTTC 118300 || || ||||| ||||||||| | | || | | ||| | | | | || | || Sbjct 4944 GCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTT 5003 Query 118301 CTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAG 118360 ||| || | |||||| || | || | | | | ||||||||||||||| || Sbjct 5004 CTTAAG-GTGTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAG 5062 Query 118361 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 118420 |||||||| || || || ||||| | || || || ||||| || || || || | Sbjct 5063 TATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAG 5122 Query 118421 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGC 118480 ||| | || || | || || ||||| || |||||||| || | ||| | Sbjct 5123 TTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAA 5182 Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540 ||| || || |||||||| | | || ||| || || || ||||||||||| Sbjct 5183 ACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTG 5242 Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATA 118600 ||||| | ||||||| | |||||||||||| || || | || || || || || Sbjct 5243 AACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTA 5302 Query 118601 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 118660 |||| | ||| || || || |||| ||| || ||||| || | |||||||| | Sbjct 5303 GTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAA 5362 Query 118661 CTTTTCGTAATCAAAACTGCGAGTCT---------------CTTCATTGACATACTTAGG 118705 |||| | | | | || ||||| |||| ||| || || || Sbjct 5363 TTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GG 5419 Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765 | ||| | || |||| ||||| |||| || ||||| | | | ||| || | ||| Sbjct 5420 TAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAAT 5479 Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825 ||| ||| |||||||| ||| || || ||||| |||||||| || ||| |||| Sbjct 5480 TTCACAGCATAAGTTTGATGACTTGATTACACCTAAGTTTTTTTGATTAGATTTTCTGTT 5539 Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885 ||| ||||||||||||| | | | || || || || || ||||| | | | ||| | Sbjct 5540 ACAAGCATCCTTGTAAACAACGAAGGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 5599 Query 118886 CTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGT 118945 | ||| | | ||| | ||| || | || || |||| |||||| || Sbjct 5600 ATACCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGT 5656 Query 118946 GTAGAGGGCTTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 119002 || || || |||||||| ||||| || | || | | || || | || || ||| Sbjct 5657 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGG 5713 Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062 |||| | | ||| ||| || || || ||||||||||| || || || ||||| Sbjct 5714 AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 5773 Query 119063 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 119122 || || | ||| | ||| | ||| ||| || | || || || | | || Sbjct 5774 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 5833 Query 119123 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCT 119178 | ||| || | ||||| || ||||| ||||||||||| | || | | ||| || Sbjct 5834 AATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCT 5893 Query 119179 TACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAA 119238 | | |||| |||||| ||||| | |||||| || || ||||||| ||| |||| Sbjct 5894 T-TTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAA 5952 Query 119239 TGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGT 119298 | | ||| | || || ||||| || ||| ||| | | | | | | | Sbjct 5953 TTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTAT 6012 Query 119299 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGC 119358 |||| || | ||||||||| || || || || || || || ||| | | || Sbjct 6013 GGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGT 6072 Query 119359 CGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAG 119418 |||| ||||| ||||| ||||| |||| | || | | ||| || |||||||||| Sbjct 6073 CGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAG 6132 Query 119419 GCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTG 119458 | | || ||||| || ||||| | ||||| | ||||| Sbjct 6133 GTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTG 6172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618377121204280