Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04-
25] 7,513 sequences; 13,166,602 total letters
Query= NC_029079.1
Length=75339
Score E
Sequences producing significant alignments: (Bits) Value
seq4988 300 8e-77
seq4563 123 1e-23
seq4010 122 4e-23
seq4583 111 8e-20
>seq4988
Length=476
Score = 300 bits (332), Expect = 8e-77
Identities = 352/475 (74%), Gaps = 3/475 (1%)
Strand=Plus/Plus
Query 66248 CATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGA 66307
||||||||| |||||| | || ||||| |||||||||||| |||||| || ||| |||
Sbjct 5 CATCGACGCCGAGCACGCACTCGACCCGGAGTACGCCAAGAAGCTCGGCGTCGACACCGA 64
Query 66308 CAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCT 66367
| ||| | || ||||||||||| || |||||||| || |||||| ||| | ||
Sbjct 65 CGCCCTGCTCGTCTCCCAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCT 124
Query 66368 CGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCG 66427
|| || |||| ||| |||| ||||| | ||||| || |||||||| |||||
Sbjct 125 GATCCGCTCGGGCGCGCTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAA 184
Query 66428 CGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTC 66487
|| ||| |||| ||||| || || ||||| |||||||| || || || |||||||||||
Sbjct 185 GGCGGAGATCGAGGGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTC 244
Query 66488 GCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGT 66547
|||||| |||||||| ||||||| | || | || |||| | ||| |
Sbjct 245 GCAGGCGCTGCGCAAGATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCAT 304
Query 66548 CAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGG 66607
||||||| | |||||||||||||| |||| || |||| | |||||| || || ||
Sbjct 305 CAACCAGCTCCGCGAGAAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGG 361
Query 66608 CGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGA 66667
|||||||| ||| |||||||||||| ||||| | || |||| ||||||| |||
Sbjct 362 TGGCAAGGCGCTGAAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCT 421
Query 66668 GAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAAC 66722
||||| ||| || || ||||||||||| ||||| ||||||||||||||||||
Sbjct 422 CAAGGAGGGCACCGACGCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAAC 476
>seq4563
Length=284
Score = 123 bits (136), Expect = 1e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 66684 GCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGC 66743
|| ||||||||||| ||||| ||||||||||||||||||||| |||| |||||| |
Sbjct 282 GCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAACAAGATGGCGCCGCCGTTCAAG 223
Query 66744 AATGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGAC 66803
| ||||||||| | || | ||||||| |||||||| || |||| | ||| |||||
Sbjct 222 CAGGCCGAGTTCGACATCCTCTACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCATCGAC 163
Query 66804 CTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGACAAG 66863
||| |||| ||| || | ||| ||||| || | ||||||| ||||| | | |
Sbjct 162 ATGGGCGTGGAGCACGGGTTCGTGCGCAAGTCCGGGTCGTGGTTCACCTACGGCGGCGAC 103
Query 66864 AACGTCGCCCAGGGCAAG 66881
| ||| |||||||||
Sbjct 102 CAGCTCGGGCAGGGCAAG 85
>seq4010
Length=1045
Score = 122 bits (134), Expect = 4e-23
Identities = 148/198 (75%), Gaps = 8/198 (4%)
Strand=Plus/Minus
Query 49718 CCACCCCAGGACCTAGCCGCCGAG-TCAGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAA 49776
|| ||||||||| | ||||||||| | ||| || ||||||| |||||| || || ||| |
Sbjct 538 CCGCCCCAGGACGTCGCCGCCGAGATGAGC-GTGCTCGGCGGCATGCTGCTGTCGAAGGA 480
Query 49777 CGCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 49833
||||| | ||| |||||| ||| || | | |||| |||||||||||| ||
Sbjct 479 CGCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCA 423
Query 49834 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCAT 49893
|| | ||||||| || |||| |||||||||| ||| ||| ||||||||| ||
Sbjct 422 CGAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGAT 363
Query 49894 CACCGTCGCCGCGGAGCT 49911
|||||||| |||||||||
Sbjct 362 CACCGTCGTCGCGGAGCT 345
>seq4583
Length=233
Score = 111 bits (122), Expect = 8e-20
Identities = 157/220 (71%), Gaps = 13/220 (6%)
Strand=Plus/Minus
Query 59530 GGCCGTCGCCAACTTCACCGTCGTGTCCAACGAACGCCGCCG-----CGACGCCCAGGGC 59584
||| || ||||||||||| || | ||||| |||||| | |||| ||||
Sbjct 215 GGCGGTGGCCAACTTCACGGTGGCGTCCA-----CGCCGCGGACCTTCGACCGCCAGTCG 161
Query 59585 AAC---TGGGTCGACGGCGACGCCACATTCCTCCGCTGCACCATCTGGCGCGACGCCGCC 59641
||| ||| ||||| ||| || ||| | |||||| | ||||||||||| |||||
Sbjct 160 AACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCG 101
Query 59642 GAGAACGTAGCGGAAAGCCTCCAGAAAGGCCAGCGCGTCATCGTGCATGGCTACCTCAAG 59701
|||||||| ||||| || ||| ||| ||||||||||||||| ||| ||||
Sbjct 100 GAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTC 41
Query 59702 CAGCGCTCCTTCGAGACCAAGGAAGGCGACAAGCGCACCG 59741
|||||||| | ||||||| || || || ||||||||||
Sbjct 40 CAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 240937936572900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |