Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04-
25] 7,513 sequences; 13,166,602 total letters
Query= NC_030917.1
Length=93577
Score E
Sequences producing significant alignments: (Bits) Value
seq3663 509 1e-139
seq4583 163 2e-35
>seq3663
Length=1069
Score = 509 bits (564), Expect = 1e-139
Identities = 510/673 (76%), Gaps = 37/673 (5%)
Strand=Plus/Minus
Query 78263 GTGTGGGATCGACTCACCGGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGAC 78322
|||||||| || ||| ||| ||||||||| |||||||||| || |||||||| ||||||
Sbjct 1037 GTGTGGGACCGCCTCGTCGGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGAC 978
Query 78323 ATCCCATCCTGGGACACCCTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACC 78382
|||| || ||| |||| || || || | ||| |||| ||||| ||||| || ||||||
Sbjct 977 ATCCAGTCGTGGAACACGCTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACC 918
Query 78383 GGCCTCACCCTGCTCGACACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGAC 78442
||||| || ||||| ||||| ||||||||||| || ||||| | ||||||||| |||||
Sbjct 917 GGCCTGACGCTGCTGGACACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGAC 858
Query 78443 GCCAACACCCCGCACGAGGAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACAC 78502
|| | ||| ||||||||||| |||||| ||||||||||||||||||||||||||| |||
Sbjct 857 GCGATCACGCCGCACGAGGAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCAC 798
Query 78503 GCCAAGTCCTACAGCTCGATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCG 78562
|||||| |||| ||||||||||| ||||| |||||| | |||| ||||| |||
Sbjct 797 GCCAAGAGCTACTCGTCGATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCG 738
Query 78563 TTCCGTTGGTCGGAGGAGAACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTAC 78622
||||| ||||||||||||||| | |||| |||||||||||| |||||||| ||||||||
Sbjct 737 TTCCGCTGGTCGGAGGAGAACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTAC 678
Query 78623 TACCGCGGCGACGACCCCTTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTC 78682
||| |||||| || | ||||| ||||| || || ||||| || ||| ||||||
Sbjct 677 TACAAGGGCGACTCGCCGCTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTCCTC 618
Query 78683 TTCTACTCGGGCTTC-------------------------------------TACCTGCC 78705
|||||||| |||||| ||||||
Sbjct 617 TTCTACTCCGGCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGCC 558
Query 78706 GATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACCGCGGACGTGATCCGGTTGATTAT 78765
||||||||||||| |||||||||||||||||||| || ||| | ||||| | || ||
Sbjct 557 GATGTACTGGTCGTCGCGCGCCAAGCTGACGAACACGGCCGACCTCATCCGCCTCATCAT 498
Query 78766 CCGAGACGAAGCAGTTCATGGGTACTACATCGGATACAAGTACCAGCGAGGCCTCGAGAC 78825
||| ||||| || || || |||||||||||||| ||||||| |||| || |||||||
Sbjct 497 CCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGTCTCGAGAA 438
Query 78826 CCAGGGGCCGGCGCGGCAGGCTGAGCTCAAGGAGTACACGTTCGATCTGCTCTCGGAGCT 78885
| |||| | || | |||||||||| |||||||||||| ||||||| |||||
Sbjct 437 GCTCTCCCCGGAGGAGCGCGACGAGCTCAAGGCGTACACGTTCGAGCTGCTCTTCGAGCT 378
Query 78886 CTACGACAACGAG 78898
||||| ||||||
Sbjct 377 GTACGAGAACGAG 365
Score = 251 bits (278), Expect = 4e-62
Identities = 206/246 (84%), Gaps = 6/246 (2%)
Strand=Plus/Minus
Query 78917 CTCTATGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTACAACGGCAAC 78976
||||| |||| |||||| || |||||||| ||||||||||||||||| ||||||| ||||
Sbjct 286 CTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGCGGTACAACGCCAAC 227
Query 78977 AAGGCGCTGATGAACCTCGGCTACGAAGCACTGTTCCCCAAGGAAGAGACC-ATGGCAGA 79035
|||||||| ||||||||||||||||| || || ||||||||||| |||||| | | || |
Sbjct 226 AAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTCCCCAAGGACGAGACCGACGTCA-A 168
Query 79036 CCCGGCCATCATGTCCGCGCTCTCACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGG 79095
|||||| ||| | || ||||| || || || |||||||||||||||||||||||||||
Sbjct 167 CCCGGCGATCCTCTCGGCGCTGTCGCCGAACGCCGACGAGAACCACGACTTCTTCTCCGG 108
Query 79096 GTCGGGCTCGAGCTACGTCATCGGCAAAGC--TGAAGCCACGGCAGATGAGGACTGGGAC 79153
||| |||||| |||||||||||||| || |||| ||| | || || |||||||||
Sbjct 107 GTCCGGCTCGTCGTACGTCATCGGCAAGGCCGTGAA--CACCGAGGACGACGACTGGGAC 50
Query 79154 TTCTGA 79159
||||||
Sbjct 49 TTCTGA 44
>seq4583
Length=233
Score = 163 bits (180), Expect = 2e-35
Identities = 161/208 (77%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 69684 TTCACGCCCTCCGGTGCCGCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTC 69743
||||| ||||| ||||| ||||| || |||||||| || ||||| || |||||| ||||
Sbjct 232 TTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTC 173
Query 69744 GACAAGCAGTCGAACGAGTGGAAGGATGCCGAGGCACTCTTCCTGCGCTGCAACGTCTGG 69803
||| |||||||||||||||||||| | || | || ||| |||||||| |||||
Sbjct 172 GACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGG 113
Query 69804 CGCGAGTACGCCGAGAACGTGACTGAGTCGCTCCAGAAGGGCGCCCGCGTCATCGTCCAG 69863
|||||| ||| |||||||| | |||||||| ||||||| ||||||||||| |||
Sbjct 112 CGCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAG 53
Query 69864 GGCAAGCTCAAGCAGCGGTCCTACGAGA 69891
||| ||| ||||| || |||||||
Sbjct 52 GGCCGCCTCGTCCAGCGCTCGTACGAGA 25
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 299294192711234
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |