Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177865.1_202017-04- 25] 7,513 sequences; 13,166,602 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq3663 509 1e-139 seq4583 163 2e-35 >seq3663 Length=1069 Score = 509 bits (564), Expect = 1e-139 Identities = 510/673 (76%), Gaps = 37/673 (5%) Strand=Plus/Minus Query 78263 GTGTGGGATCGACTCACCGGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGAC 78322 |||||||| || ||| ||| ||||||||| |||||||||| || |||||||| |||||| Sbjct 1037 GTGTGGGACCGCCTCGTCGGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGAC 978 Query 78323 ATCCCATCCTGGGACACCCTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACC 78382 |||| || ||| |||| || || || | ||| |||| ||||| ||||| || |||||| Sbjct 977 ATCCAGTCGTGGAACACGCTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACC 918 Query 78383 GGCCTCACCCTGCTCGACACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGAC 78442 ||||| || ||||| ||||| ||||||||||| || ||||| | ||||||||| ||||| Sbjct 917 GGCCTGACGCTGCTGGACACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGAC 858 Query 78443 GCCAACACCCCGCACGAGGAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACAC 78502 || | ||| ||||||||||| |||||| ||||||||||||||||||||||||||| ||| Sbjct 857 GCGATCACGCCGCACGAGGAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCAC 798 Query 78503 GCCAAGTCCTACAGCTCGATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCG 78562 |||||| |||| ||||||||||| ||||| |||||| | |||| ||||| ||| Sbjct 797 GCCAAGAGCTACTCGTCGATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCG 738 Query 78563 TTCCGTTGGTCGGAGGAGAACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTAC 78622 ||||| ||||||||||||||| | |||| |||||||||||| |||||||| |||||||| Sbjct 737 TTCCGCTGGTCGGAGGAGAACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTAC 678 Query 78623 TACCGCGGCGACGACCCCTTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTC 78682 ||| |||||| || | ||||| ||||| || || ||||| || ||| |||||| Sbjct 677 TACAAGGGCGACTCGCCGCTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTCCTC 618 Query 78683 TTCTACTCGGGCTTC-------------------------------------TACCTGCC 78705 |||||||| |||||| |||||| Sbjct 617 TTCTACTCCGGCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGCC 558 Query 78706 GATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACCGCGGACGTGATCCGGTTGATTAT 78765 ||||||||||||| |||||||||||||||||||| || ||| | ||||| | || || Sbjct 557 GATGTACTGGTCGTCGCGCGCCAAGCTGACGAACACGGCCGACCTCATCCGCCTCATCAT 498 Query 78766 CCGAGACGAAGCAGTTCATGGGTACTACATCGGATACAAGTACCAGCGAGGCCTCGAGAC 78825 ||| ||||| || || || |||||||||||||| ||||||| |||| || ||||||| Sbjct 497 CCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGTCTCGAGAA 438 Query 78826 CCAGGGGCCGGCGCGGCAGGCTGAGCTCAAGGAGTACACGTTCGATCTGCTCTCGGAGCT 78885 | |||| | || | |||||||||| |||||||||||| ||||||| ||||| Sbjct 437 GCTCTCCCCGGAGGAGCGCGACGAGCTCAAGGCGTACACGTTCGAGCTGCTCTTCGAGCT 378 Query 78886 CTACGACAACGAG 78898 ||||| |||||| Sbjct 377 GTACGAGAACGAG 365 Score = 251 bits (278), Expect = 4e-62 Identities = 206/246 (84%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 78917 CTCTATGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTACAACGGCAAC 78976 ||||| |||| |||||| || |||||||| ||||||||||||||||| ||||||| |||| Sbjct 286 CTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGCGGTACAACGCCAAC 227 Query 78977 AAGGCGCTGATGAACCTCGGCTACGAAGCACTGTTCCCCAAGGAAGAGACC-ATGGCAGA 79035 |||||||| ||||||||||||||||| || || ||||||||||| |||||| | | || | Sbjct 226 AAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTCCCCAAGGACGAGACCGACGTCA-A 168 Query 79036 CCCGGCCATCATGTCCGCGCTCTCACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGG 79095 |||||| ||| | || ||||| || || || ||||||||||||||||||||||||||| Sbjct 167 CCCGGCGATCCTCTCGGCGCTGTCGCCGAACGCCGACGAGAACCACGACTTCTTCTCCGG 108 Query 79096 GTCGGGCTCGAGCTACGTCATCGGCAAAGC--TGAAGCCACGGCAGATGAGGACTGGGAC 79153 ||| |||||| |||||||||||||| || |||| ||| | || || ||||||||| Sbjct 107 GTCCGGCTCGTCGTACGTCATCGGCAAGGCCGTGAA--CACCGAGGACGACGACTGGGAC 50 Query 79154 TTCTGA 79159 |||||| Sbjct 49 TTCTGA 44 >seq4583 Length=233 Score = 163 bits (180), Expect = 2e-35 Identities = 161/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 69684 TTCACGCCCTCCGGTGCCGCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTC 69743 ||||| ||||| ||||| ||||| || |||||||| || ||||| || |||||| |||| Sbjct 232 TTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTC 173 Query 69744 GACAAGCAGTCGAACGAGTGGAAGGATGCCGAGGCACTCTTCCTGCGCTGCAACGTCTGG 69803 ||| |||||||||||||||||||| | || | || ||| |||||||| ||||| Sbjct 172 GACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGG 113 Query 69804 CGCGAGTACGCCGAGAACGTGACTGAGTCGCTCCAGAAGGGCGCCCGCGTCATCGTCCAG 69863 |||||| ||| |||||||| | |||||||| ||||||| ||||||||||| ||| Sbjct 112 CGCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAG 53 Query 69864 GGCAAGCTCAAGCAGCGGTCCTACGAGA 69891 ||| ||| ||||| || ||||||| Sbjct 52 GGCCGCCTCGTCCAGCGCTCGTACGAGA 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299294192711234