Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04-
25] 23,151 sequences; 12,698,172 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq7869 260 2e-64
seq5489 228 1e-54
seq4177 217 2e-51
>seq7869
Length=1564
Score = 260 bits (288), Expect = 2e-64
Identities = 698/1064 (66%), Gaps = 5/1064 (0%)
Strand=Plus/Plus
Query 63019 ACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 63078
||||||| ||||| |||| ||||||| ||| ||||||| |||||||| |||| ||
Sbjct 342 ACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAA 401
Query 63079 TGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 63138
||| || |||||||||||| | |||| ||| | ||| | | ||| | | | || |
Sbjct 402 CGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTT 461
Query 63139 TTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGT 63198
| || || || | | |||| | ||||| | ||||| | || |||||||
Sbjct 462 TGAT---AGTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGT 518
Query 63199 CTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 63258
| || || || | || | |||| | ||| | | || | ||| || |
Sbjct 519 CACCGTAACAATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCAT 578
Query 63259 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTG 63318
|| | || || ||||| || |||||||||||||| ||||| || | ||||||||
Sbjct 579 TTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTG 638
Query 63319 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63378
| | |||||| || || ||||| ||| ||| | || | | ||||||| ||
Sbjct 639 CACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCAT 698
Query 63379 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63438
|||| ||||||| ||| | ||| | | ||||| | ||| || || ||||| || | |
Sbjct 699 GCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACAT 758
Query 63439 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGG 63498
| | || |||||||| |||| | | ||| ||||| | |||||| || |||| || |
Sbjct 759 AACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTG 818
Query 63499 TACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 63558
|||| | || || ||| | | |||||| ||| || |||||| || || || |
Sbjct 819 TACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAG 878
Query 63559 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCAT 63618
| |||| || || || || ||| || || ||||| || || || || || || |
Sbjct 879 CAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCT 938
Query 63619 CGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATA 63678
| ||||| || | ||||| |||||||| | | ||| || ||||| || |
Sbjct 939 CCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACA 998
Query 63679 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTG 63738
| || ||||| ||||| ||||| ||||| ||| | | || ||||| || | ||| |
Sbjct 999 ACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAG 1058
Query 63739 AGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTT 63798
|| ||||| | || || |||| |||||| | ||| | | || || || | ||
Sbjct 1059 CCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTT 1118
Query 63799 CAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 63858
| | | || ||| ||| | | || || || |||||||||||||||||||||||
Sbjct 1119 CGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAAT 1178
Query 63859 AGTTGTA-TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTG 63917
| |||| |||||| |||| || || | ||| | || || | |||||||| | ||
Sbjct 1179 AACTGTACTGAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCC 1237
Query 63918 TTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTA 63977
| || |||| | | | || || || |||| | | || ||| | || |||
Sbjct 1238 ATGACAATATTGTAGACATCATCAGAGATCATGGGAGCAGGCTTACCAGTAGCAGCATTG 1297
Query 63978 ACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGA 64037
|| || | | | ||| || | || | | |||| ||||| | |||| || |||| |
Sbjct 1298 ACGTATCTATAAAGATCTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAA 1357
Query 64038 TTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081
|| || ||||| |||||||| ||||| |||| ||||| |||||
Sbjct 1358 TTAGAAATGGCAATTCTGGCCGCTAGGGTGGCGTAATCTGGATG 1401
>seq5489
Length=2629
Score = 228 bits (252), Expect = 1e-54
Identities = 1010/1572 (64%), Gaps = 53/1572 (3%)
Strand=Plus/Minus
Query 62036 CTTGTCCAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62094
|||| ||||| | |||||||| | |||||| |||| || ||| | || |||||||| |
Sbjct 1569 CTTGATCAATGGTAAATTGAATAGCAGCGGAGGCGGCTTGCGTTCTTAAGTAGTACATAC 1510
Query 62095 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTC 62153
| ||||||| ||| |||| ||||| ||||||||||| || | || || |
Sbjct 1509 CAGTTTTTAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTAATCTTACCCATTGATG 1450
Query 62154 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62213
| ||| | | | ||||| || ||| ||||||||| || | | || |||
Sbjct 1449 GTGCTTGCAAGAAA-AGATTCAAGGAATGAGACTGATCGATGTAGATGGCACGATCAGCA 1391
Query 62214 GCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62273
||||| || || || |||||||| | |||||||| | ||||| || | | ||| |
Sbjct 1390 GCCATATTGATAATGGTCTTTTGAGAGATTTCCCAGACGGTTTTGTATAATTCCTTCAAT 1331
Query 62274 TCTTCTGGAAGGTTTG-TATTC--TGAATGGATCCACCATCTACCATAATCC--TATTCT 62328
|||| ||| | |||| || | ||||| || ||||| | |||| |||| |
Sbjct 1330 TCTTGTGGCACATTTGGTAAGCCTTGAATAGA---ACCATTTTGTGTAATTAGATATTGT 1274
Query 62329 TG-ATCTCATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGGTTAAC 62386
| || ||||| ||| ||| | ||| |||| | | || | || || |||||
Sbjct 1273 TTCATACTATCATCCCA-AATGCCCAGGTCGACTAAATCACGTAGTAAATATGGATTAAC 1215
Query 62387 TACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62446
||||||||||| ||||||| || | |||| ||| || || ||| ||||| |
Sbjct 1214 AACTTGGAATTCACCAGACAGGACACGACGAGAGTACATGTTTGAGGTCACTGGTTCGAA 1155
Query 62447 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62506
| ||||||| || | |||||| | |||||| || || ||||| ||||||| ||
Sbjct 1154 GCATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCATAGTCAA 1095
Query 62507 ACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTT----AGATGTTCCCAATTCCAAA 62562
| ||||| | || ||||| | | | || ||| || | |||||||| ||| |
Sbjct 1094 AGAGTTTCTTAACCC--ATGTT-TAACAATGTCCTTTCTTAAGGT-TTCCCAATCCCACA 1039
Query 62563 GATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATC 62622
| | ||| | | |||||| |||||| || || || |
Sbjct 1038 TGCCAAATGGTTTAGCGTTCCACATATCGAATTGTAAAATACCCTTGGAAGCTGGAGAAC 979
Query 62623 CTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCAC 62682
|| || | ||| |||| ||||| || | || | || ||| || || | | |
Sbjct 978 CTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGAGTAG 919
Query 62683 CGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATG 62742
| | ||||| ||||| ||||| | || |||||| ||| ||||| ||||| |
Sbjct 918 CATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCCGATTCAAAGG 859
Query 62743 GATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTAT 62802
| | || | ||| | | || || || || || ||||||| | | ||||||||||
Sbjct 858 GTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGTCTAT 799
Query 62803 GTCTCTTATTAGAGATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 62861
| || |||| || ||||| ||| || |||| ||||| |||||| || |||| | |
Sbjct 798 GCTTCATATTTGA-ATTTCTAGCCTCGGGAACTGGATAGTAATTACGGTCGATAACTCTG 740
Query 62862 TTGAGATTTCTGAC-AATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC--GC 62918
|| | | || ||| ||| ||||| | | || | || | | |||| | | | ||
Sbjct 739 TTCA-AGTTGTGAGTAATGACTTTAGCAATCTCGTGCAATCTCTCGAAATTATAGCTTGC 681
Query 62919 -------CCATCTATTACAAAC-------ATGTTC--AATGCAACAGATGCCAGATTACA 62962
|||||| | || | ||| | | |||| ||| || | ||||||
Sbjct 680 AGTTTTACCATCTTCTGAAACCTCAACGAATGCTGGTAGGGCAATAGAAGCTAAATTACA 621
Query 62963 CACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 63022
|| || |||| || | ||||| | || ||| || | |||| | ||
Sbjct 620 AACTGCAGTTTCATCAGGGGAGGAATATTCGACGATTTCACAACATAAATTAGATGATTT 561
Query 63023 GATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 63082
|||||| ||||| || ||||| || |||| ||||||| || |||||||||| |||||
Sbjct 560 GATAGTACCTAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTATAAACCATGAA 501
Query 63083 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTAT 63142
|| ||||| ||||| |||| | || | ||| || | ||| | | | || || ||
Sbjct 500 AGGTGTACCTGTTTCTGTCTGTGCTTGCAAAATGGCATACCACAACTTTTGGGCTTTAAT 441
Query 63143 TATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCC 63202
| | ||| | | |||||||||||| ||||||| | | ||| || || || ||
Sbjct 440 TGT---TTTACCACGACCTTCTCTTTCGTAACGAGTATATAGTTCTTCAAATTCATCGCC 384
Query 63203 CCAAACATTGTC-CAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 63261
||| |||| || || || || || || || | | ||| | ||| || || |
Sbjct 383 CCACACATCATCTAAACCTGGGGCA-GCACTGGGCGAAAACAAAGTCCAAGGCCCATCCT 325
Query 63262 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTC 63321
| | || |||||||| || || ||||| ||||| ||||| || | |||||||| |
Sbjct 324 CTTGAACACGTTTCATGAAAAGGTCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCAC 265
Query 63322 TATGTTCCTCGTTTCC-TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGC 63380
| ||| || || || ||| || ||| | | ||||| || | | ||||| | ||||
Sbjct 264 GAATTTCTTCCTTACCATGTGTT-TTTCTGATATCGACAAAGTCGAAGATATCTGCATGC 206
Query 63381 CACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTAT 63440
|| || |||||| | | ||| | | | ||||| | ||||| || ||||| || | ||
Sbjct 205 CATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAA 146
Query 63441 CTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTA 63500
| || |||||||| |||| | | ||| ||||| | |||||||| |||| ||||||
Sbjct 145 CGGGCAGTGTTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTA 86
Query 63501 CCGGAGATATAGCCTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGC 63559
|| | |||||| || ||| ||| || || | || ||| ||||| | || |||||
Sbjct 85 CCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGA-AGACCAACACCACCTGC 27
Query 63560 CATTTTAGAGAT 63571
|||| || ||
Sbjct 26 AGTTTTGGAAAT 15
>seq4177
Length=3506
Score = 217 bits (240), Expect = 2e-51
Identities = 594/899 (66%), Gaps = 13/899 (1%)
Strand=Plus/Minus
Query 33271 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 33330
|||| |||||||| || |||||||| ||| || | |||||||| || ||||| |
Sbjct 3394 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 3336
Query 33331 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttt 33390
| || |||| || || |||||||||||||| || || || || ||||| ||| |
Sbjct 3335 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 3276
Query 33391 tAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTT 33450
| || || | | || ||| || |||||||| || | ||| ||||| | |
Sbjct 3275 TGTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 3216
Query 33451 CACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCAAT 33508
|| ||||| |||| | |||||| | || | ||||| | |||| |||||||
Sbjct 3215 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 3158
Query 33509 GGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCA-CTCGGTGGATGTAATAAAT 33567
|| || | || | ||| | |||| | || || | | | | | ||||
Sbjct 3157 TTCCACAGCCTCGGTGACAATTTTTTCAACGATGGCTGGGTCTGGTTTGTTCTTC-AAAT 3099
Query 33568 GTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGT 33627
| |||| ||| ||||| || ||| ||||| ||| |||||||||| || |||||||
Sbjct 3098 GGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGT 3039
Query 33628 TAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATG 33687
| ||||| || | |||||||| | || | |||||| | ||| || ||||| || || |
Sbjct 3038 TGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGG 2979
Query 33688 ATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG 33747
| ||||| || |||| ||||| | | |||||||||| ||||| || ||| | ||
Sbjct 2978 AACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGG 2919
Query 33748 CGCT---GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 33804
|| ||| || ||||| || |||||| |||||||||| | || || |
Sbjct 2918 CGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGG 2859
Query 33805 TTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA 33864
| | |||||||| || | | | |||| ||| || || | |||||||||||||
Sbjct 2858 TGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCA 2799
Query 33865 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATC 33924
| | || |||| || ||||| |||||||| || || || ||||||||||
Sbjct 2798 ACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCT 2739
Query 33925 TAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTC 33984
| ||||| | ||| || ||||| || | || ||| | || |||||||| || || |
Sbjct 2738 TTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATAC 2679
Query 33985 CATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--G 34041
| ||| || || ||||| || | || || ||| || | ||| ||| ||
Sbjct 2678 CGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCA 2619
Query 34042 TTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATG 34101
|| || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || |
Sbjct 2618 TTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAG 2559
Query 34102 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 34160
| || || || || || | |||||| ||||| || | ||| ||||||| ||||
Sbjct 2558 AAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 2500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629635338659280
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