Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04-
25] 23,151 sequences; 12,698,172 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq7869 199 4e-46
seq4177 134 1e-26
seq4734 118 1e-21
seq5489 100 3e-16
seq2776 100 3e-16
>seq7869
Length=1564
Score = 199 bits (220), Expect = 4e-46
Identities = 423/629 (67%), Gaps = 2/629 (0%)
Strand=Plus/Plus
Query 38006 CATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTT 38065
||| || ||| || || | ||| || | |||||| | ||||| |||| || ||||||
Sbjct 576 CATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTC 635
Query 38066 TGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAG 38125
| | | | ||| || || || ||||| || | | |||||| ||||||||||
Sbjct 636 TTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAG 695
Query 38126 CGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAA 38185
| ||||||||||| | |||| | | || || |||||||||| ||| ||||| | ||
Sbjct 696 CATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAA 755
Query 38186 TATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGT 38245
||| | | |||||||| | | | | |||||| | || ||| ||||| | ||||
Sbjct 756 CATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGT 815
Query 38246 TTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCAC 38305
|| |||| | || |||| ||| | | || || ||| || | || || ||||
Sbjct 816 TTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCAC 875
Query 38306 CTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGT 38365
| ||| ||| || || ||||| |||| || || || || | || || || ||| ||
Sbjct 876 CAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGT 935
Query 38366 CATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAA 38425
| ||||| || | | | |||||| ||||||||||| |||||| ||||| || |
Sbjct 936 CCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGA 995
Query 38426 ATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTA 38485
| || || ||||| || || | || ||||| |||| | ||||| |||||||
Sbjct 996 ACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAG 1055
Query 38486 CATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTC 38545
|| | || ||||| | ||||| || ||||| | || ||||| | | ||||||||| |
Sbjct 1056 CAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGAC 1115
Query 38546 TTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAA 38605
||| | || | || | | |||| ||| || ||| || ||||| | ||||
Sbjct 1116 GTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAA 1175
Query 38606 AATAACTATA-TGAATAATCTCTATCGTA 38633
||||||| || |||| ||||||| || ||
Sbjct 1176 AATAACTGTACTGAA-AATCTCTGTCATA 1203
>seq4177
Length=3506
Score = 134 bits (148), Expect = 1e-26
Identities = 397/602 (66%), Gaps = 24/602 (4%)
Strand=Plus/Minus
Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680
|||| || || ||||| || || |||||||||||||||| || | ||| || |||
Sbjct 3093 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 3034
Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740
|| ||||| |||||||||| |||| ||||| | ||| || || | ||||| |||||
Sbjct 3033 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 2974
Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCT-T 11796
|| || || | || || | | ||||| || |||| |||||| ||| | | | |
Sbjct 2973 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 2914
Query 11797 GTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC----ATTG 11852
| || || |||||| || ||||| || || ||| | || ||| | || |
Sbjct 2913 GCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGATGG 2859
Query 11853 TTTCTATAGCGTTAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTAT 11910
| | || || || || | ||| || ||||| || || | | || ||||| ||
Sbjct 2858 TGTGAATGGCATTGAACAAGAATTCA--CTTTCTTTAGGGTCCTTGATGTAAGTATCGAT 2801
Query 11911 TAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACA 11970
|| || || |||| || ||||||||||| || ||||| || || |||||||
Sbjct 2800 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 2741
Query 11971 TCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAAT 12030
|||||||| | || || || | || |||| | || || ||||| |||||
Sbjct 2740 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 2681
Query 12031 ACCATCACTAGATGCAAAAAATGCTAGTA-TATGTTTTATAAAGTATTTTTCGTCTTTAG 12089
||| ||| || || ||||| || || | | || || || || | |||| | | |
Sbjct 2680 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTG-GAAATGAAAAATCTCTCGT-TCTCG 2623
Query 12090 TTAAT----TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAA 12145
|| || || | ||| |||| | ||| || || ||||| | ||||||| |||||||
Sbjct 2622 TTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 2563
Query 12146 AAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATA 12205
||| || | | | || || || |||||| ||||| ||||| |||||||||| |
Sbjct 2562 AAAGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGA 2503
Query 12206 AC 12207
||
Sbjct 2502 AC 2501
>seq4734
Length=670
Score = 118 bits (130), Expect = 1e-21
Identities = 403/620 (65%), Gaps = 15/620 (2%)
Strand=Plus/Minus
Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873
||||| | || ||||||| ||| ||||| || || || | ||| |||||||||||
Sbjct 624 GATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCTTCAATCCCTTCTTCCATCCGTAA 565
Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGA 36933
||||||||||| || ||||| | || || | || | | ||| || |||
Sbjct 564 AAATGCATACTTGTTAGTTTACCCATAGTTGGGGCACGTAAGAACAAATTCAAAGAATGA 505
Query 36934 CTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATC 36993
|||||| ||| | || | ||||||||||| | | ||| ||||| || ||
Sbjct 504 GATTGATCAATATAGACAGAACGATCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATT 445
Query 36994 TCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATA 37050
|||||||| || || |||| | || | | | ||| | | | || ||||||
Sbjct 444 TCCCAAACAGTCTTGTATAAGTCCTTCAATTCTTGTGGAACGTTTGGTAAGCCTTGAATG 385
Query 37051 GAACCATTATGT---AACACAATTGTATTCTTT-ATGTCATTATTCCACATATTTCTACT 37106
|| ||||| ||| | || | || | ||| || | | || ||| ||| | |
Sbjct 384 GAGCCATTTTGTGTAATCAGA----TACTGTTTCATACCCTCATCCCAAATACCTAAATC 329
Query 37107 TATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCT 37166
| | || | || || || || || |||||||| || || || ||||| || | |
Sbjct 328 AACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTGGAATTCACCGGATAAGACACGACG 269
Query 37167 TGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGT 37226
| || |||||| ||| |||||| | | ||||||| || |||||||| |||||
Sbjct 268 GGAGTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGT 209
Query 37227 AGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATG-TGTATTAATTC 37285
||||||||||| |||||||| || | | |||||| | ||||| | || | ||
Sbjct 208 GGATGCAGTAGGAATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATC 149
Query 37286 TCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTT-TAACCACATATCATAT 37344
| || || || | | ||||||||| | | || ||||| || |||||||||| |
Sbjct 148 TTTTCTTAAGGT-GTCCCAATCCCA-CATGCCGTAGGGTTTTTGGTCCCACATATCAAAC 91
Query 37345 TGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTA 37404
||||| ||||||| | || ||||| | | | || || || || |||| | | |
Sbjct 90 TGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGA 31
Query 37405 GCTAGTTCGCAACTAGATTC 37424
|||||||| ||| || |||
Sbjct 30 GCTAGTTCACAAGAAGCTTC 11
>seq5489
Length=2629
Score = 100 bits (110), Expect = 3e-16
Identities = 280/418 (67%), Gaps = 20/418 (5%)
Strand=Plus/Minus
Query 37188 TGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGC 37247
|||||| | | | ||||||| || | ||||| || || || || || |||||||||||
Sbjct 1163 TGGTTCGAAGCATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGC 1104
Query 37248 TATTAG--AAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTA--GTTCATTCC 37303
|| || || | ||||| || |||||| || ||| |||| ||| ||| | ||
Sbjct 1103 CAT-AGTCAAAGAG-TTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTT--TCCC 1048
Query 37304 AATCCCATAAATCTGTTGGGTT--CTTTAACCACATATCATATTGTAGAATACCTTTACT 37361
||||||| | | ||| || | || ||||||||| |||||| |||||| ||
Sbjct 1047 AATCCCACATGCCAAATGGTTTAGCGTT--CCACATATCGAATTGTAAAATACCCTTGGA 990
Query 37362 CGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGA 37421
||||||||| | | | | || ||| || | ||| || | ||| || |
Sbjct 989 AGCTGGAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGC 930
Query 37422 TTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTC 37481
||| || | |||| || || |||||||| |||||| | |||| ||| ||||||||
Sbjct 929 TTCAAGAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTC 870
Query 37482 GCTATCGAATGCATAGCC-CAATAATATAAACACATCAGCCAAACCCTGAACACCGATAC 37540
| || || | ||| | ||| | ||| | ||| ||||||||||| ||||| | |
Sbjct 869 -CGATTCAAAGGGTAGACGCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAG 811
Query 37541 CTATGGGTCTATGTTTCTTATTAGA---TCTAGACGATTCTATCACTGGATAATAATT 37595
| || |||||||| ||| |||| || ||||| | || |||||||| |||||
Sbjct 810 CAATAGGTCTATGCTTCATATTTGAATTTCTAGCC---TCGGGAACTGGATAGTAATT 756
>seq2776
Length=1029
Score = 100 bits (110), Expect = 3e-16
Identities = 202/297 (68%), Gaps = 2/297 (1%)
Strand=Plus/Minus
Query 38338 AACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGAC 38397
|| ||||| | |||||||| ||| ||||||||| || | | || ||||| ||||
Sbjct 1028 AAAGTATCGTAAATACCTTCGATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGAC 969
Query 38398 ATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTT 38457
|||||||| ||| || || ||||| ||||| || || || || || |||| || ||
Sbjct 968 ATTTGAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTT 909
Query 38458 TCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGA 38517
||||| ||||||| || | | ||| || ||||| | || || ||||||||
Sbjct 908 AACGACATCAAATTATAAGTCTTCAGCACAGATTCGATATCGCTACCATGGATACCTAGC 849
Query 38518 GATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGA 38577
| || | ||||| || ||| || || | |||| | || | ||| || | || |
Sbjct 848 GCCACACGCATTACCAAATGCTGAGGACGTTCTGCCACTTCACCGTTCAGTCTTAGCAAG 789
Query 38578 TACGATTTTTCTAATGTTTTTATTCCAAAATAACTATA-TGAATAATCTCTATCGTA 38633
||||| || | ||| || | ||| ||||| |||| || | |||| ||||||||
Sbjct 788 TACGAACGCTCCAGTGTCTTGAATCCGAAATACGTATACTGGA-AATCCCTATCGTA 733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468389214779440
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