Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04- 25] 23,151 sequences; 12,698,172 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq9304 132 6e-26 seq5708 114 2e-20 seq6323 96.9 4e-15 >seq9304 Length=5825 Score = 132 bits (146), Expect = 6e-26 Identities = 388/589 (66%), Gaps = 28/589 (5%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| |||| || ||||| | ||| ||| ||| || ||||||||| || Sbjct 4683 AAGTTTGAAGATTTGGGTGTCGGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGA 4624 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517 || ||||| | || ||||| | | ||| ||||| | || | ||| | Sbjct 4623 GCGTTTGCAAGTCGAATCTTTCCTCCTTCAGTTATAGAAAAACTGGGTATTTCTCATGTT 4564 Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577 ||||| | |||| | || ||||| ||| ||||| || ||||| || || ||| Sbjct 4563 AAAGGTTTGCTATTGTACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATT 4504 Query 164578 GCT-CAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGA 164632 | | ||| | | ||| || || || ||||| || |||||||| ||| | |||| Sbjct 4503 GGTACAA--TGCTGAAT-GCTAAAGAGCCC--AAAATCGTCAATGGTCCAGAAATTTTGA 4449 Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAG 164692 ||| || || ||| ||||||| || || | || || ||| |||| || |||| || Sbjct 4448 GCAAGTACGTTGGTTCTTCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAG 4389 Query 164693 AACAAAAGAAAGC--AGGTTTAGCTAG-TAAATTACATGTTATTGTTTTTGATGAGATAG 164749 || | | | || ||| | || | | |||||| ||||| |||| |||||| | | Sbjct 4388 AATATAGG---GCCAAGGGTGAGGAATCTTCCTTACATATTATTATTTTCGATGAGCTGG 4332 Query 164750 ATGCTCTTTGCAAAAAACGTGGT------GATAATATTATTCATGATG----CAGTG--G 164797 || || ||| ||| | | ||| | | || || | || | || || | Sbjct 4331 ATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAG 4272 Query 164798 TTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAG 164857 ||||||| ||| | ||||||| |||||||| || || ||||||||||| || | | Sbjct 4271 TTAATCAATTGTTAGCTAAAATGGATGGTGTTGATCAGTTGAATAATATTTTGGTTATTG 4212 Query 164858 GTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAAT 164917 |||||||||| || |||||||| || |||| | || || || ||| |||| ||| Sbjct 4211 GTATGACCAATCGTAAAGATTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAG 4152 Query 164918 TGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966 | || | ||||| |||||||| || ||||| | || |||||||| Sbjct 4151 TCCAAGTTGAAATTCATTTACCCGATGAAAAAGGAAGACTCCAAATTTT 4103 >seq5708 Length=3614 Score = 114 bits (126), Expect = 2e-20 Identities = 123/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 19341 TAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAG 19400 ||||| || | || || ||| |||| ||||| || ||||||||| | | |||||| | Sbjct 678 TAAGAACTACAAAGATTCCTCAAATTGGTGACAAATTTGCTTCTCGTCACGGTCAAAAGG 619 Query 19401 GCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGC 19460 | || |||||| | |||||| |||||||||||| ||||| ||| ||||| || | Sbjct 618 GTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACCGCAGAAGGTATTGTTC 559 Query 19461 CGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 | ||| | ||||||||||| |||||| ||||| ||| ||||| Sbjct 558 CAGATTTGATTATTAACCCTCATGCTATTCCATCTCGTATGAC 516 >seq6323 Length=6462 Score = 96.9 bits (106), Expect = 4e-15 Identities = 293/456 (64%), Gaps = 35/456 (8%) Strand=Plus/Plus Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869 ||||||||| | || | || || ||| ||||| ||| ||||| || | |||||||| Sbjct 91 TTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAAT 150 Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929 || |||||||| | ||| || ||| ||| |||||| | || || || ||||| || Sbjct 151 GAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGA 210 Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAG- 6988 || | ||||| ||||| || || |||||||| || | ||| || || ||| Sbjct 211 TGCAATGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAAT----AAGC 266 Query 6989 ATAAAA---------TATTG------------TCTATAG---------CATAAAATTGAC 7018 || ||| || | ||| | | |||| || || Sbjct 267 ATGAAAGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTG 326 Query 7019 ACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCA 7078 | || | ||| ||||| || ||| | | || | ||||| ||| ||||| ||| ||| Sbjct 327 AAAAAATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCA 386 Query 7079 TTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGAT 7138 | | || | |||||| | |||||||| |||| ||| |||| || ||||||| Sbjct 387 TAATGATTCTTCTATCGTAGGGATTTGTCTTTAGTTTATGAATAACCTGTTTCAATTGAT 446 Query 7139 CTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCC 7198 | ||||| || || ||| | || || | | || ||||| |||||||| |||| Sbjct 447 CAATACCTTGTCCAGTATAGTCGTCATCGCACGTCTTGTATTTAGCACCAAAATGCCTCC 506 Query 7199 ATTGAAACCCATAAATAGGACCTAAATCACCTTCTT 7234 ||||||| ||||||| || || | ||| ||| ||| Sbjct 507 ATTGAAATCCATAAACGGGCCCCAGATCTCCTACTT 542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595699562091600