Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04- 25] 23,151 sequences; 12,698,172 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq7869 271 9e-68 seq5489 239 6e-58 seq4177 219 5e-52 >seq7869 Length=1564 Score = 271 bits (300), Expect = 9e-68 Identities = 756/1148 (66%), Gaps = 15/1148 (1%) Strand=Plus/Plus Query 62889 AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATC 62948 |||||||| || |||| |||||||| || |||| | | | | |||| | || Sbjct 263 AAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAATT 322 Query 62949 TCAGTGCA-AAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007 ||| ||| ||| || | ||||||| ||||| |||| ||||||| ||| |||| Sbjct 323 TCACAGCATAAGTTTGATG-ACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 381 Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067 ||| |||||||| |||| || ||| || |||||||||||| | |||| ||| | ||| | Sbjct 382 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 441 Query 63068 TTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGT 63127 | ||| | | | || || || || || | | |||| | ||||| | || Sbjct 442 ATACCATAATTTTTGGGCTTTGAT---AGTCTTACCACGACCTTCTTTCTCGTAGCGGGT 498 Query 63128 ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACA 63187 ||| | || |||||||| || || || | || |||||| | ||| | Sbjct 499 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGTTGGAGA 558 Query 63188 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63247 | || | ||| || | || | || || ||||| || |||||||||||||| || Sbjct 559 GAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAG 618 Query 63248 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63307 ||| || | |||||| | | | |||||| || || ||||| ||| ||| | Sbjct 619 AGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAAT 678 Query 63308 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63367 || | | ||||||| |||||| ||||||| ||| | ||| | | ||||| | ||| Sbjct 679 AAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTT 738 Query 63368 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63427 || || ||||| || | || | || |||||||| |||| | | ||| ||||| | Sbjct 739 ATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAA 798 Query 63428 ACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAAT 63487 |||||| || |||| || ||||| | || || ||| | | |||||| ||| || Sbjct 799 ACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGAT 858 Query 63488 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATA 63547 |||||| || || || || |||| || || || || ||| || || ||||| || Sbjct 859 ATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTA 918 Query 63548 GATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63607 || ||||| || || || ||||| || | ||||| |||||||| | Sbjct 919 AATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTT 978 Query 63608 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63667 ||| || ||||| || || || ||||| ||||| ||||| ||||| ||| | | Sbjct 979 TGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAA 1038 Query 63668 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63727 || ||||| || | ||| | || ||||| | || || |||| |||||| | ||| Sbjct 1039 GTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCAT 1098 Query 63728 TAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTT 63786 | | || || || | ||| | | |||| ||| ||| | | || || || || Sbjct 1099 AATTAAATGTTGTGGACGTTCGGCCA-CTTGACCGTTGATTCTTAGTAAATAAGAACGTT 1157 Query 63787 CCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCGTTCGTAAATAATAACCGAG 63845 |||||||||||||||||||||| |||| |||||| |||| || || | ||| | ||| Sbjct 1158 CCAAAGTTTTAAAACCAAAATAACTGTACTGAAAA-TCTCTGTCATAGACAATTGCGGAG 1216 Query 63846 TTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATA-CTT--GAAATAATCGGA 63902 || | ||||||||| | || | || |||| || || | | | || || || ||| Sbjct 1217 TTCAATTTATCCTTGTTTTCCATGACAATAT---TGTAGACATCATCAGAGATCATGGGA 1273 Query 63903 GAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAAT 63962 | | | || ||| | || ||| || || | | | ||| || | || | | |||| Sbjct 1274 GCAGGCTTACCAGTAGCAGCATTGACGTATCTATAAAGATCTTCGACAACCTTAGAAAAT 1333 Query 63963 AGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAA 64022 ||||| | |||| || |||| ||| || | ||| |||||||| ||||| |||| ||| Sbjct 1334 TGTTTTGTGGTTTGTTTATGTAAATTAGAAATGGCAATTCTGGCCGCTAGGGTGGCGTAA 1393 Query 64023 TCCGGATG 64030 || ||||| Sbjct 1394 TCTGGATG 1401 >seq5489 Length=2629 Score = 239 bits (264), Expect = 6e-58 Identities = 1003/1565 (64%), Gaps = 39/1565 (2%) Strand=Plus/Minus Query 61985 CTTGTCCAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62043 |||| ||||| | |||||||| | |||||| |||| || ||| | || |||||||| | Sbjct 1569 CTTGATCAATGGTAAATTGAATAGCAGCGGAGGCGGCTTGCGTTCTTAAGTAGTACATAC 1510 Query 62044 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTC 62102 | ||||||| ||| |||| ||||| ||||||||||| || | || || | Sbjct 1509 CAGTTTTTAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTAATCTTACCCATTGATG 1450 Query 62103 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62162 | ||| | | | ||||| || ||| ||||||||| || | | || ||| Sbjct 1449 GTGCTTGCAAGAAA-AGATTCAAGGAATGAGACTGATCGATGTAGATGGCACGATCAGCA 1391 Query 62163 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62222 ||||| || || || |||||||| | |||||||| | ||||| || | | ||| | Sbjct 1390 GCCATATTGATAATGGTCTTTTGAGAGATTTCCCAGACGGTTTTGTATAATTCCTTCAAT 1331 Query 62223 TCTTCTGGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62279 |||| ||| | |||| || | ||||| || ||| | || || | |||| || Sbjct 1330 TCTTGTGGCACATTTGGTAAGCCTTGAATAGAACCATTTTGTGTAATTAGA-TATTGTTT 1272 Query 62280 -ATCTCATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTA 62337 || ||||| ||| ||| | ||| |||| | | || | || |||||||| | Sbjct 1271 CATACTATCATCCCA-AATGCCCAGGTCGACTAAATCACGTAGTAAATATGGATTAACAA 1213 Query 62338 CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCG 62397 |||| ||||| ||||||| || | |||| ||| || || ||| ||||| | Sbjct 1212 CTTGGAATTCACCAGACAGGACACGACGAGAGTACATGTTTGAGGTCACTGGTTCGAAGC 1153 Query 62398 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAAC 62457 | ||||||| || | |||||| | |||||| || || ||||| ||||||| ||| Sbjct 1152 ATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCATAGTCAAAG 1093 Query 62458 TATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 62517 ||||| | || | | | || | | | ||| | |||||||| ||| | | Sbjct 1092 AGTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTTTCCCAATCCCACATGCCAA 1033 Query 62518 ACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACAT 62577 | ||| | | ||||| |||||| || || || ||| || Sbjct 1032 ATGGTTTAGCGTTCCACATATCGAATTGTAAAATACCCTTGGAAGCTGGAGAACCTTCAA 973 Query 62578 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 62637 | ||| ||| ||||| || | || | |||||| || || | | | | | | Sbjct 972 AAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGAGTAGCATGGT 913 Query 62638 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT 62697 |||| ||||||||||| | || |||||| ||| ||||| ||||| || | Sbjct 912 AAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCCGATTCAAAGGGTAGAC 853 Query 62698 TTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 62757 || | ||| | | || || || || || ||||||| | | ||||||||||| || Sbjct 852 GCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGTCTATGCTTCA 793 Query 62758 TATTAGAGATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62816 |||| || ||||| ||| || |||| ||||| |||||| || |||| | | || | | Sbjct 792 TATTTGA-ATTTCTAGCCTCGGGAACTGGATAGTAATTACGGTCGATAACTCTGTTCA-A 735 Query 62817 TTTCTGAC-AATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC--GC------ 62867 || ||| ||| ||||| | | || | || | | |||| | | | || Sbjct 734 GTTGTGAGTAATGACTTTAGCAATCTCGTGCAATCTCTCGAAATTATAGCTTGCAGTTTT 675 Query 62868 -CCATCTATTACAAAC-------ATGTTC--AAGGCAACAGATGCCAGATTACAAACGGC 62917 |||||| | || | ||| | | ||||| ||| || | ||||||||| || Sbjct 674 ACCATCTTCTGAAACCTCAACGAATGCTGGTAGGGCAATAGAAGCTAAATTACAAACTGC 615 Query 62918 TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGT 62977 |||| || | ||||| | || ||| || | |||| | |||||||| Sbjct 614 AGTTTCATCAGGGGAGGAATATTCGACGATTTCACAACATAAATTAGATGATTTGATAGT 555 Query 62978 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGT 63037 ||||| || ||||| || |||| ||||||| || |||||||||| ||||| || || Sbjct 554 ACCTAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTATAAACCATGAAAGGTGT 495 Query 63038 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGA 63097 ||| ||||| |||| | || | ||| || | ||| | | | || || ||| | Sbjct 494 ACCTGTTTCTGTCTGTGCTTGCAAAATGGCATACCACAACTTTTGGGCTTTAATTGT--- 438 Query 63098 TTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAAC 63157 ||| | | |||||||||||| | ||||| | | ||| || || || ||||| || Sbjct 437 TTTACCACGACCTTCTCTTTCGTAACGAGTATATAGTTCTTCAAATTCATCGCCCCACAC 378 Query 63158 ATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 63217 || || || || || || || | | ||| | ||| || || || | || Sbjct 377 ATCATCTAAACCTGGGGCAGCACTGGGCGAAAACAAAGTCCAAGGCCCATCCTCTTGAAC 318 Query 63218 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 63277 |||||||| || || ||||| ||||| ||||| || | |||||| | | | ||| Sbjct 317 ACGTTTCATGAAAAGGTCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTC 258 Query 63278 CTCGTTTCC-TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 63336 || || || ||| || ||| | | ||||| || | | ||||| | |||||| || | Sbjct 257 TTCCTTACCATGTGTT-TTTCTGATATCGACAAAGTCGAAGATATCTGCATGCCATGGCT 199 Query 63337 CCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 63396 ||||| | | ||| | | | ||||| | ||||| || ||||| || | || | || | Sbjct 198 CCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAACGGGCAG 139 Query 63397 TGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGA 63456 ||||||| |||| | | ||| ||||| | |||||||| |||| |||||||| | || Sbjct 138 TGTTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAGCGA 79 Query 63457 TATAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTA 63515 |||| || ||| ||| || || | || ||| ||||| | || ||||| |||| Sbjct 78 TATAAGAACCTGTGGAACGGATGTTGTTGATATGA-AGACCAACACCACCTGCAGTTTTG 20 Query 63516 GAGAT 63520 || || Sbjct 19 GAAAT 15 >seq4177 Length=3506 Score = 219 bits (242), Expect = 5e-52 Identities = 592/898 (66%), Gaps = 11/898 (1%) Strand=Plus/Minus Query 32993 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 33052 |||| |||||||| || |||||||| ||| || | |||||||| || ||||| | Sbjct 3394 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 3336 Query 33053 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 33112 | || |||| || || |||||||||||||| || || || || || || ||| | Sbjct 3335 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 3276 Query 33113 tAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTT 33172 | || || | | || ||| || |||||||| || | ||| ||||| | | Sbjct 3275 TGTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 3216 Query 33173 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAAT-TCTT-GTTCAAT 33230 || ||||| |||| | |||||| | || | ||||| | |||| ||||||| Sbjct 3215 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 3158 Query 33231 GGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATG 33290 || || || || | ||| | |||| | || ||| | | ||||| Sbjct 3157 TTCCACAGCCTCGGTGACAATTTTTTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAATG 3098 Query 33291 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTT 33350 |||| ||| ||||| || ||| ||||| ||| |||||||||| || | |||||| Sbjct 3097 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 3038 Query 33351 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGA 33410 |||||| || | |||||||| | || | |||||| | ||| || ||||| || || || Sbjct 3037 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 2978 Query 33411 TCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 33470 || || || |||| ||||| | | |||||||||| ||||| || ||| | ||| Sbjct 2977 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 2918 Query 33471 G---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33527 | ||| || ||||| || |||||| |||||||||| | || || || Sbjct 2917 GTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGT 2858 Query 33528 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 33587 | |||||||| || | | | |||| ||| || || | |||||||||||||| Sbjct 2857 GTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAA 2798 Query 33588 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 33647 | || |||| || ||||| |||||||| || || || |||||||||| | Sbjct 2797 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 2738 Query 33648 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCC 33707 ||||| | ||| || ||||| || | || ||| |||| |||||||| || || || Sbjct 2737 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 2678 Query 33708 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GT 33764 |||| || || ||||| || | || || ||| || | ||| ||| || | Sbjct 2677 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCAT 2618 Query 33765 TAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 33824 | || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || || Sbjct 2617 TCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGA 2558 Query 33825 TGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACA 33882 || || || || || | |||||| |||| || | ||| ||||||| |||| Sbjct 2557 AGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 2500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622766926867160