Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04- 25] 23,151 sequences; 12,698,172 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq7869 260 2e-64 seq5489 215 7e-51 seq4177 187 3e-42 >seq7869 Length=1564 Score = 260 bits (288), Expect = 2e-64 Identities = 750/1145 (66%), Gaps = 9/1145 (1%) Strand=Plus/Plus Query 62744 AATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATC 62803 || ||||| || |||| |||||||| || |||| | | | | |||| | || Sbjct 263 AAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAATT 322 Query 62804 TCAGTGCA-AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 62862 ||| ||| ||| || | |||||||| ||||| |||| ||||||| ||| |||| Sbjct 323 TCACAGCATAAGTTTGATG-ACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 381 Query 62863 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 62922 ||| |||||||| |||| || ||| || |||||||||||| | |||| ||| | ||| | Sbjct 382 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 441 Query 62923 TTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGT 62982 | ||| | | | || || || || || | |||| | ||||| | || Sbjct 442 ATACCATAATTTTTGGGCTTTGAT---AGTCTTACCACGACCTTCTTTCTCGTAGCGGGT 498 Query 62983 ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACA 63042 ||| | || |||||||| || || || | | |||||| | ||| | Sbjct 499 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGTTGGAGA 558 Query 63043 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63102 | || | ||| || | || | || || ||||| || |||||||||||||| || Sbjct 559 GAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAG 618 Query 63103 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63162 ||| || | |||||| | | | |||||| || || ||||| ||| ||| | Sbjct 619 AGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAAT 678 Query 63163 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63222 || | | ||||||| |||||| ||||||| ||| | ||| | | ||||| | ||| Sbjct 679 AAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTT 738 Query 63223 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63282 || || ||||| || | || | || |||||||| |||| | | ||| ||||| | Sbjct 739 ATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAA 798 Query 63283 ACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAAT 63342 ||| || || ||||| || || || | || || ||| | | |||||| ||| || Sbjct 799 ACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGAT 858 Query 63343 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 63402 |||||| || || || || |||| || || || || ||| || || || || || Sbjct 859 ATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTA 918 Query 63403 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63462 || ||||| ||| || ||| ||||| || | ||||| |||||||| | Sbjct 919 AATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTT 978 Query 63463 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAG 63522 ||| || ||||| || || || ||||| ||||||||||| ||||| ||| | | Sbjct 979 TGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAA 1038 Query 63523 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63582 || ||||| || | ||| | || ||||| | || || |||| |||||| | ||| Sbjct 1039 GTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCAT 1098 Query 63583 TAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTT 63641 | | || || || | ||| | | |||| ||| ||| | | || || || || Sbjct 1099 AATTAAATGTTGTGGACGTTCGGCCA-CTTGACCGTTGATTCTTAGTAAATAAGAACGTT 1157 Query 63642 CCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCGTTCGTAAATAATAACCGAG 63700 |||||||||||||||||||||| |||| |||||| |||| || || | ||| | ||| Sbjct 1158 CCAAAGTTTTAAAACCAAAATAACTGTACTGAAAA-TCTCTGTCATAGACAATTGCGGAG 1216 Query 63701 TTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATAGGAAAA 63760 || | ||||||||| | || | || | || | | | || || || ||| | Sbjct 1217 TTCAATTTATCCTTGTTTTCCATGACAATATTGTAGACATCATCAGAGATCATGGGAGCA 1276 Query 63761 TGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGt 63820 | || ||| | || |||||| || | | | ||| || | || | | |||| || Sbjct 1277 GGCTTACCAGTAGCAGCATTGACGTATCTATAAAGATCTTCGACAACCTTAGAAAATTGT 1336 Query 63821 ttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCC 63880 ||| | |||| ||| |||| ||| || | ||| ||||| || ||||| |||| ||||| Sbjct 1337 TTTGTGGTTTGTTTATGTAAATTAGAAATGGCAATTCTGGCCGCTAGGGTGGCGTAATCT 1396 Query 63881 GGATG 63885 ||||| Sbjct 1397 GGATG 1401 >seq5489 Length=2629 Score = 215 bits (238), Expect = 7e-51 Identities = 998/1565 (64%), Gaps = 39/1565 (2%) Strand=Plus/Minus Query 61840 CTTGTCCAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 61898 |||| ||||| | |||||||| | |||||| |||| || ||| | || |||||||| | Sbjct 1569 CTTGATCAATGGTAAATTGAATAGCAGCGGAGGCGGCTTGCGTTCTTAAGTAGTACATAC 1510 Query 61899 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTC 61957 | ||||||| ||| |||| ||||| ||||||||||| || | || || | Sbjct 1509 CAGTTTTTAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTAATCTTACCCATTGATG 1450 Query 61958 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62017 | ||| | | | ||||| || ||| ||||||||| || | | || ||| Sbjct 1449 GTGCTTGCAAGAAA-AGATTCAAGGAATGAGACTGATCGATGTAGATGGCACGATCAGCA 1391 Query 62018 GCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62077 ||||| || ||||| |||||||| | |||||||| | ||||| || | | ||| | Sbjct 1390 GCCATATTGATAATGGTCTTTTGAGAGATTTCCCAGACGGTTTTGTATAATTCCTTCAAT 1331 Query 62078 TCTTCTGGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62134 |||| ||| | |||| || | ||||| || ||| | || || | |||| || Sbjct 1330 TCTTGTGGCACATTTGGTAAGCCTTGAATAGAACCATTTTGTGTAATTAGA-TATTGTTT 1272 Query 62135 -ATCTCATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTA 62192 || ||||| ||| ||| | ||| |||| | | || | || |||||||| | Sbjct 1271 CATACTATCATCCCA-AATGCCCAGGTCGACTAAATCACGTAGTAAATATGGATTAACAA 1213 Query 62193 CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAG 62252 |||| ||||| ||||||| || | |||| ||| || || ||| ||||| | Sbjct 1212 CTTGGAATTCACCAGACAGGACACGACGAGAGTACATGTTTGAGGTCACTGGTTCGAAGC 1153 Query 62253 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAAC 62312 | ||||||| || | |||||| | |||||| || || ||||| ||||||| ||| Sbjct 1152 ATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCATAGTCAAAG 1093 Query 62313 TATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 62372 ||||| | || | | | || | | | ||| | |||||||| ||| | | Sbjct 1092 AGTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTTTCCCAATCCCACATGCCAA 1033 Query 62373 ACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACAT 62432 | ||| | | ||||| |||||| || || || ||| || Sbjct 1032 ATGGTTTAGCGTTCCACATATCGAATTGTAAAATACCCTTGGAAGCTGGAGAACCTTCAA 973 Query 62433 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 62492 | ||| ||| ||||| || | || | |||||| || || | | | | | | Sbjct 972 AAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGAGTAGCATGGT 913 Query 62493 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAAT 62552 |||| ||||||||||| | || |||||| ||| ||||| ||||| || | Sbjct 912 AAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCCGATTCAAAGGGTAGAC 853 Query 62553 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 62612 || | ||| | | || || || || || ||||||| | | ||||||||||| || Sbjct 852 GCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGTCTATGCTTCA 793 Query 62613 TATTAGAGATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62671 |||| || ||||| ||| || |||| ||||| |||||| || |||| | | || | | Sbjct 792 TATTTGA-ATTTCTAGCCTCGGGAACTGGATAGTAATTACGGTCGATAACTCTGTTCA-A 735 Query 62672 TTTCTGAC-AATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC--GC------ 62722 || ||| ||| ||||| | | || | || | | |||| | | | || Sbjct 734 GTTGTGAGTAATGACTTTAGCAATCTCGTGCAATCTCTCGAAATTATAGCTTGCAGTTTT 675 Query 62723 -CCATCTATTACAAAC-------ATGTTC--AATGCAACAGATGCCAGATTACAAACGGC 62772 |||||| | || | ||| | | |||| ||| || | ||||||||| || Sbjct 674 ACCATCTTCTGAAACCTCAACGAATGCTGGTAGGGCAATAGAAGCTAAATTACAAACTGC 615 Query 62773 TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGT 62832 |||| || | ||||| | || ||| || | |||| | ||||| || Sbjct 614 AGTTTCATCAGGGGAGGAATATTCGACGATTTCACAACATAAATTAGATGATTTGATAGT 555 Query 62833 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGT 62892 ||||| || ||||| || |||| ||||||| || |||||||||| ||||| || || Sbjct 554 ACCTAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTATAAACCATGAAAGGTGT 495 Query 62893 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGA 62952 ||| ||||| |||| | || | ||| || | ||| | | | || || ||| | Sbjct 494 ACCTGTTTCTGTCTGTGCTTGCAAAATGGCATACCACAACTTTTGGGCTTTAATTGT--- 438 Query 62953 TTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAAC 63012 ||| | |||||||||||| | ||||| | | ||| || || || ||||| || Sbjct 437 TTTACCACGACCTTCTCTTTCGTAACGAGTATATAGTTCTTCAAATTCATCGCCCCACAC 378 Query 63013 ATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 63072 || || | || || || || | | ||| | ||| || || || | || Sbjct 377 ATCATCTAAACCTGGGGCAGCACTGGGCGAAAACAAAGTCCAAGGCCCATCCTCTTGAAC 318 Query 63073 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 63132 |||||||| || || ||||| ||||| ||||| || | |||||| | | | ||| Sbjct 317 ACGTTTCATGAAAAGGTCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTC 258 Query 63133 CTCGTTTCC-TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTT 63191 || || || ||| || ||| | | ||||| || | | ||||| | |||||| || | Sbjct 257 TTCCTTACCATGTGTT-TTTCTGATATCGACAAAGTCGAAGATATCTGCATGCCATGGCT 199 Query 63192 CCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGG 63251 ||||| | | ||| | | | ||||| | ||||| || ||||| || | || | || | Sbjct 198 CCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAACGGGCAG 139 Query 63252 TGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGA 63311 ||||||| |||| | | ||| ||||| | || || || ||||| ||||| || | || Sbjct 138 TGTTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAGCGA 79 Query 63312 TATAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTA 63370 |||| || ||| ||| || || | || ||| ||||| | || ||||| |||| Sbjct 78 TATAAGAACCTGTGGAACGGATGTTGTTGATATGA-AGACCAACACCACCTGCAGTTTTG 20 Query 63371 GAGAT 63375 || || Sbjct 19 GAAAT 15 >seq4177 Length=3506 Score = 187 bits (206), Expect = 3e-42 Identities = 585/898 (65%), Gaps = 11/898 (1%) Strand=Plus/Minus Query 32350 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 32409 |||| |||||||| || |||||||| ||| || | |||||||| || ||||| | Sbjct 3394 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 3336 Query 32410 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttt 32469 |||| | || || || ||||||||||||||||| || || || || || ||| | Sbjct 3335 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 3276 Query 32470 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 32529 | || || | | || ||| || ||||| || || | ||| ||||| | | Sbjct 3275 TGTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 3216 Query 32530 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCAAT 32587 || ||||| |||| | |||||| | || | ||||| | |||| ||||||| Sbjct 3215 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCAAT 3158 Query 32588 AGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATG 32647 || || || || | ||| | || | || ||| | | ||||| Sbjct 3157 TTCCACAGCCTCGGTGACAATTTTTTCAACGATGGCTGGGTCTGGTTTGTTCTTCAAATG 3098 Query 32648 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 32707 |||| ||| ||||| || ||| ||| | ||| |||||||||| || |||||||| Sbjct 3097 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 3038 Query 32708 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 32767 |||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| || Sbjct 3037 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 2978 Query 32768 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 32827 || || || || | ||||| | | |||||||||| ||||| || ||| | ||| Sbjct 2977 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 2918 Query 32828 G---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 32884 | ||| || ||||| || |||||| |||||||||| | || || || Sbjct 2917 GTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGGT 2858 Query 32885 CTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAA 32944 | || ||||| || | | | |||| ||| || || | || ||||| ||||| Sbjct 2857 GTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAA 2798 Query 32945 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCT 33004 | || |||| || ||||| |||||||| ||||| || |||||||| | | Sbjct 2797 CAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTT 2738 Query 33005 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCC 33064 ||||| | ||| || ||||| || | || ||| | || |||||||| || || || Sbjct 2737 TGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACC 2678 Query 33065 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT--GT 33121 |||| || || ||||| || | || || ||| || | ||| ||| || | Sbjct 2677 GTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCAT 2618 Query 33122 TAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 33181 | || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || || Sbjct 2617 TCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGA 2558 Query 33182 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 33239 || || || || || | |||||| ||||| || | || || |||| |||| Sbjct 2557 AGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 2500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633448634819600