Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04- 25] 23,151 sequences; 12,698,172 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1558 123 2e-23 seq7869 82.4 7e-11 >seq1558 Length=8598 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || |||||||||||||| || || ||| | ||| || | Sbjct 6764 CTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 6823 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| || || || ||||| ||||| || Sbjct 6824 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCCTTG 6883 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | |||||| ||||| || ||||| || |||| Sbjct 6884 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAGGGTAATA 6943 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || ||||||| ||| || || |||||||||||| Sbjct 6944 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 6979 >seq7869 Length=1564 Score = 82.4 bits (90), Expect = 7e-11 Identities = 200/303 (66%), Gaps = 0/303 (0%) Strand=Plus/Minus Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900 |||| |||||||| | ||||| || ||| ||||| || |||| | | | Sbjct 1185 TACAGTTATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAA 1126 Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960 || ||||||||| |||||| | | ||| | ||||| ||||| | ||||| | || Sbjct 1125 GTGGCCGAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGAT 1066 Query 122961 ATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGT 123020 ||||| || ||||| || | |||||||||| ||||| ||| || ||||| | Sbjct 1065 ATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCT 1006 Query 123021 CCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACC 123080 || || |||||| ||||| || ||||| |||| || ||||| ||| | || Sbjct 1005 CCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCC 946 Query 123081 TTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCC 123140 || || ||| ||| || || || || || ||| || || || ||||||||| Sbjct 945 ATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCC 886 Query 123141 AAA 123143 ||| Sbjct 885 AAA 883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451872395923960