Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04- 25] 23,151 sequences; 12,698,172 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq7869 140 4e-28 >seq7869 Length=1564 Score = 140 bits (154), Expect = 4e-28 Identities = 636/998 (64%), Gaps = 34/998 (3%) Strand=Plus/Plus Query 116205 GGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGAC 116264 ||| || || |||||||| | | ||| ||| || || || ||||||||||| || Sbjct 28 GGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTGAAC 87 Query 116265 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAA 116324 ||| | ||||||| | |||||||||||| || |||| || || || || || | Sbjct 88 ACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTA 147 Query 116325 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 116384 ||| | ||| || || || |||| ||| || ||||| || | |||||||| | || Sbjct 148 ATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAATTT 207 Query 116385 TTCGTAATCAAAACTGCGAGTCTC---------------TTCATTGACATACTTAGGAAG 116429 || | | | | || ||||| |||| ||| || || || | Sbjct 208 TTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GGTAA 264 Query 116430 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 116489 ||| | || |||| ||||| |||| || ||||| | | | ||| || | |||||| Sbjct 265 GGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAATTTC 324 Query 116490 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 116549 || || ||||| ||| ||| || ||||| |||||||| || ||| ||||||| Sbjct 325 ACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACA 384 Query 116550 CGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 116609 ||||||||||| | | | || || || || || ||||| | | | ||| | | Sbjct 385 AGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATA 444 Query 116610 CCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 116669 ||||| | |||| | ||| || | || || || | |||||| || || Sbjct 445 CCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGTATA 501 Query 116670 GAGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTAT-CTGGACA 116726 || ||||||||||| ||||| ||| | || | | || || | || || |||| | Sbjct 502 TAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGGAGA 558 Query 116727 GAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAG 116786 ||| | | ||| ||| || || || ||||||||||| || || || ||||| || Sbjct 559 GAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAG 618 Query 116787 CGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 116846 || | ||| | ||| | ||| ||| || | || || || | | || | Sbjct 619 AGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAAT 678 Query 116847 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGC 116902 ||| || | ||||| || ||||| ||||||||||| | || | | ||| ||| Sbjct 679 AAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTT-T 737 Query 116903 GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGA 116962 | |||| |||||| ||||| | || || || || || |||| ||| ||||| | Sbjct 738 TATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTA 797 Query 116963 TACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGG 117021 ||| | ||| || ||||| || ||| || || ||| | | | | ||| Sbjct 798 AACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTT-GAACGAATGTTATGG 856 Query 117022 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCG 117081 || || | ||||||||| || || || || || || || ||| | | || || Sbjct 857 ATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCG 916 Query 117082 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGC 117141 || ||||| ||||| ||||| |||| | || | | ||| || |||||||| || Sbjct 917 TAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGT 976 Query 117142 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 117179 |||| ||||| || ||||| | ||||| | ||||| Sbjct 977 TTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTG 1014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613329658685160