Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04- 25] 23,151 sequences; 12,698,172 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq4177 161 1e-34 >seq4177 Length=3506 Score = 161 bits (178), Expect = 1e-34 Identities = 360/537 (67%), Gaps = 9/537 (2%) Strand=Plus/Minus Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 ||||| || |||||||| || || |||||||| ||||||| |||||||| || ||| Sbjct 3093 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 3034 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 |||||||| || ||||| | |||||| ||||| | ||| || || | ||||| || || Sbjct 3033 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 2974 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 || || || | |||||||| | ||||| || || || | | ||| || | | Sbjct 2973 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 2914 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTC---AATTGTT 37403 || ||||||| || | ||| || ||||| | | | ||| || || Sbjct 2913 GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTT---CTCACCGATTTCTGGGATGGTG 2857 Query 37404 TCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGT 37463 | ||| || || || | || | |||||| | || | || |||||||| || | Sbjct 2856 TGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAAC 2797 Query 37464 AAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTA 37523 || || |||||||||||||||||||||| || || ||||| || |||| | | Sbjct 2796 AAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTT 2737 Query 37524 GCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCA 37583 || || | | ||| || ||| | | || | | | | |||||||||||||| || || Sbjct 2736 GCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCG 2677 Query 37584 TCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATA 37641 ||| ||| || || || |||||||| || ||| ||| || | | || || Sbjct 2676 TCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTCATT 2617 Query 37642 AT-TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 | || ||||| |||| ||||| || || ||||||| ||| ||| ||||||| ||| Sbjct 2616 CTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 2560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592145390922040