Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04- 25] 23,151 sequences; 12,698,172 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq7869 322 7e-83 seq5489 268 1e-66 seq2776 118 1e-21 >seq7869 Length=1564 Score = 322 bits (356), Expect = 7e-83 Identities = 745/1117 (67%), Gaps = 7/1117 (1%) Strand=Plus/Plus Query 69364 TTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTT 69423 |||| |||||| ||| ||||||| || |||||||||| || || || ||||||||| Sbjct 359 TTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTT 418 Query 69424 TCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAA 69483 ||| | |||| ||| | ||| || | ||| | || || || ||||| | Sbjct 419 TCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGATA---GTCTTACCA 475 Query 69484 CGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCC 69543 || ||||| || || | |||||||| || || || || || || ||| Sbjct 476 CGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTT 535 Query 69544 AATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTC 69603 || |||||| | ||||| | | |||| ||| ||| || | || || ||| Sbjct 536 AAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTC 595 Query 69604 ATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTT 69663 || || ||||| |||||||| ||||| || | |||||| | | | |||| || || Sbjct 596 ATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTA 655 Query 69664 CCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 69723 || || || ||| ||| | ||| || | ||||||| |||||||||||| || || Sbjct 656 CCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAA 715 Query 69724 ATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTA 69783 | || | | || |||| |||||| || ||||| || | || | |||||||||||| Sbjct 716 AGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTG 775 Query 69784 TAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTT 69843 | || | | ||| ||||| | ||| ||||| |||| ||||| |||| ||| ||| Sbjct 776 AAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAA 835 Query 69844 CCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGA 69903 || ||| ||||| ||| ||| |||||| || || || || |||| || || | | Sbjct 836 CCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAA 895 Query 69904 GCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGA 69963 ||||| ||||| ||||| || || ||||| || || || ||||| || | Sbjct 896 GCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAG 955 Query 69964 AAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGA 70023 ||||| ||||||||| | | | ||| || ||||| || || || ||||| |||||| Sbjct 956 AAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGA 1015 Query 70024 GTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTG 70082 || || ||||| ||| | || || || ||||| | ||| | || ||||| | || | Sbjct 1016 GTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCG 1075 Query 70083 ATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATT 70142 || || |||| ||||| | ||| | | ||| || || ||||| || || | || Sbjct 1076 -TGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCACTTGACCGTT 1134 Query 70143 TATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA-TGAAAAGT 70201 ||| | | | || || ||||| ||||||||| |||||||| |||| |||||| | Sbjct 1135 GATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTACTGAAAA-T 1193 Query 70202 CTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAA 70261 |||| || || | ||| | || || | ||||||||| | || | || |||| | Sbjct 1194 CTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAATATTGTAGA 1253 Query 70262 CAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAAT 70321 || | ||||| || |||| | |||||| | || ||| || || | | | || Sbjct 1254 CATCATCAGAGATCATGGGAGCAGGCTTACCAGTAGCAGCATTGACGTATCTATAAAGAT 1313 Query 70322 CTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTC 70381 |||| | || | | |||| ||||| | |||| || |||||||| || ||||| |||| Sbjct 1314 CTTCGACAACCTTAGAAAATTGTTTTGTGGTTTGTTTATGTAAATTAGAAATGGCAATTC 1373 Query 70382 TGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAG 70441 |||| ||||| | || || || ||||| ||||| | ||| | |||| || | Sbjct 1374 TGGCCGCTAGGGTGGCGTAATCTGGATGAACAGTAGTCATATAAGCGCATGTTTCAGCGG 1433 Query 70442 CTAACGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478 |||| | |||| ||| || ||||| || || | ||| Sbjct 1434 CTAAGTTGTCTAGTTCGATTGTTGTGACACCTTCATA 1470 >seq5489 Length=2629 Score = 268 bits (296), Expect = 1e-66 Identities = 1021/1576 (65%), Gaps = 55/1576 (3%) Strand=Plus/Minus Query 68370 CAATG-TAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTT 68428 ||||| |||| ||||| | | ||| |||| || || | || ||||||||||| |||| Sbjct 1563 CAATGGTAAATTGAATAGCAGCGGAGGCGGCTTGCGTTCTTAAGTAGTACATACCAGTTT 1504 Query 68429 TCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGG--AATAACTTGGATC 68486 | | ||| |||| ||||||||||||||||| || | || | | | ||| | Sbjct 1503 TTAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTAATCTTACCCATTGA--TGGTGC 1446 Query 68487 G-GCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCA 68545 || | | || ||||| || ||| ||||||||| | | | ||| || |||| Sbjct 1445 TTGCAAGAA-AAGATTCAAGGAATGAGACTGATCGATGTAGATGGCACGATCAGCAGCCA 1387 Query 68546 TTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCAT 68605 | || ||||| ||||||||| |||||||| | || || | | | || | || | Sbjct 1386 TATTGATAATGGTCTTTTGAGAGATTTCCCAGACGGTTTTGTATAATTCCTTCAATTCTT 1327 Query 68606 CTGGAAGGCTCG-TATT--TTGAATGGATCCACCATCGGATATAATTA--TATTCTTG-A 68659 ||| | | | || |||||| || ||||| | |||||| |||| || | Sbjct 1326 GTGGCACATTTGGTAAGCCTTGAATAGA---ACCATTTTGTGTAATTAGATATTGTTTCA 1270 Query 68660 TCTCATCATTCCACAATTTTCTCTCCGT-TAAAACTCTAAGGAGATGCGGATTAACTATT 68718 | ||||| ||| ||| | || |||| | | || | || |||||||| | | Sbjct 1269 TACTATCATCCCA-AATGCCCAGGTCGACTAAATCACGTAGTAAATATGGATTAACAACT 1211 Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 || ||||| ||||| | || | ||||| ||| || || ||| |||||| | || Sbjct 1210 TGGAATTCACCAGACAGGACACGACGAGAGTACATGTTTGAGGTCACTGGTTCGAAGCAT 1151 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 ||||||| || |||||||| | |||||| || |||||||| ||||||| ||| Sbjct 1150 TCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCATAGTCAAAGAG 1091 Query 68839 TTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCC-AATCCCAAAGATCAGA 68897 ||||| | |||||| | | || | | | ||| | |||||| ||||||| | || | Sbjct 1090 TTTCTTAACCCATGTTTAACAATGTCCTTTCTTA-AGGTTTCCCAATCCCACATGCCAAA 1032 Query 68898 TGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATA 68957 |||| | | ||||| | |||| |||||| ||| || || || || || | | | Sbjct 1031 TGGTTTAGCGTTCCACATATCGAATTGTAAAATACCCTTGGAAGCTGGAGAACCTTCAAA 972 Query 68958 TGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATA 69017 || ||| ||||| | || || | |||||| || || | | | | | || Sbjct 971 AGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGAGTAGCATGGTA 912 Query 69018 AATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATA-AT 69076 ||| |||||||| || | || || ||| ||| |||||| | || || || || | Sbjct 911 AATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTC-CGATTCAAAGGGTAGAC 853 Query 69077 GTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCT 69136 | || | ||| | | ||| ||||| ||||| || |||| | | ||||||||||| || Sbjct 852 GCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGTCTATGCTTCA 793 Query 69137 TATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGAT 69196 |||||||| || ||| || |||| ||||| |||||| || |||| | | || | | Sbjct 792 TATTTGAATTTCTAGCCTCGGGAACTGGATAGTAATTACGGTCGATAACTCTGTTCA-AG 734 Query 69197 TTCGGACTACT-ACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATA 69255 || || || | |||||| | | || | | | | |||| | | | | || | || Sbjct 733 TTGTGAGTAATGACTTTAGCAATCTCGTGCAATCTCTCGAAATTATAGCTTGCAGTTTTA 674 Query 69256 ACA--------------AACATATTC----AGTGCTACAGATGCTAGATTACAAACTGCT 69297 || ||| || | || || | ||| |||| |||||||||||| Sbjct 673 CCATCTTCTGAAACCTCAACGAATGCTGGTAGGGCAATAGAAGCTAAATTACAAACTGCA 614 Query 69298 ACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTC 69357 |||| || | ||||| | || || ||||| |||| |||||||||| Sbjct 613 GTTTCATCAGGGGAGGAATATTCGACGATTTCACAACATAAATTAGATGATTTGATAGTA 554 Query 69358 CCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTA 69417 || | || || || || |||| ||||||| |||||||| |||| || || || ||| Sbjct 553 CCTAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTATAAACCATGAAAGGTGTA 494 Query 69418 CCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAG--CATTTATTACGG 69475 || ||||| |||| | || | ||| | | ||| | || | | | || ||| | Sbjct 493 CCTGTTTCTGTCTGTGCTTGCAAAATGGCATACCACA--ACTTTTGGGCTTTAATT---G 439 Query 69476 TCTTGTAACG--CTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCA 69533 | || ||| ||||||||| | || | |||||||| ||| |||||||| ||||| Sbjct 438 TTTTACCACGACCTTCTCTTT--CGTAACGAGTATATAGTTCTTCAAATTCATCGCCCCA 381 Query 69534 AACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTT 69593 |||||||| || || || || | || | | ||| | ||| |||| || | Sbjct 380 CACATCATCTAAACCTGGGGCAGCACTGGGCGAAAACAAAGTCCAAGGCCCATCCTCTTG 321 Query 69594 AACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATT 69653 ||| |||||||| || || || || ||||| ||||| || | |||||| | | | | Sbjct 320 AACACGTTTCATGAAAAGGTCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCACGAAT 261 Query 69654 TTCTTCATTTCC-TGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATG 69712 |||||| || || ||| ||||| | | ||||| ||| || | ||||| | |||||||| Sbjct 260 TTCTTCCTTACCATGTGTTTTTCTGAT-ATCGACAAAGTCGAAGATATCTGCATGCCATG 202 Query 69713 GTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGG 69772 | || | | | || | | || |||| || || || ||||| || | || | || Sbjct 201 GCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAACGGG 142 Query 69773 CAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAG 69832 |||||||||| | || | | ||| ||||| | || || || |||| || || |||| Sbjct 141 CAGTGTTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAG 82 Query 69833 AAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTT 69892 |||||| ||| | | || || || | ||| ||||| | || ||||| ||| Sbjct 81 CGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTGCAGTTT 22 Query 69893 TAGAGATTAGAGCACA 69908 | || || | |||||| Sbjct 21 TGGAAATCATAGCACA 6 >seq2776 Length=1029 Score = 118 bits (130), Expect = 1e-21 Identities = 331/499 (66%), Gaps = 8/499 (2%) Strand=Plus/Minus Query 69915 CAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGA 69974 ||| || || || ||||| || || ||||| ||||| || | ||||| ||| Sbjct 1029 CAAAGTATCGTAAATACCTTCGATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGA 970 Query 69975 CATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTT 70034 ||||||| ||||| || || || || ||||| || || || ||||||||||| || | Sbjct 969 CATTTGAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCT 910 Query 70035 TTCAGAAAGCAGATTGTATGT-TTCAATAGCTGATTCTATATCCCACTGATGAATTCCTA 70093 | || | || ||| || || |||| | | ||||| ||||| | ||| || |||| Sbjct 909 TAACGACATCAAATTATAAGTCTTCAGCA-CAGATTCGATATCGCTACCATGGATACCTA 851 Query 70094 TCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACA 70153 ||| |||||||| | || ||||||||| |||||| || || | || | | | | || Sbjct 850 GCGCCACACGCATTACCAAATGCTGAGGACGTTCTGCCACTTCACCGTTCAGTCTTAGCA 791 Query 70154 GGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA-TGAAAAGTCTCTTTCGTAA 70212 ||| || ||||| || || || || ||||| | || || ||| || || ||||| Sbjct 790 AGTACGAACGCTCCAGTGTCTTGAATCCGAAATACGTATACTGGAAA-TCCCTATCGTAC 732 Query 70213 ATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAGTAGGT--G 70270 | || | || || | |||| || | || | || || | ||| | | || | Sbjct 731 ACGATGGCCGAGTTCAAAGTATCTTTGTTTTCCATGACAATGT-TGTAA-ATTTCGTCCG 674 Query 70271 AGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTA 70330 | || || |||| | || ||| | || |||| ||| | |||||| || || | Sbjct 673 AAATCATAGGAGCATGCTTTCCAGTAGCTGGGTTAATCCAGTCGTGTAAATCCTCAATAA 614 Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390 | | ||| | ||| | |||| ||| ||||| || || ||||| ||||| || |||| Sbjct 613 CTTTGGAGAATTGCTTTGTGGTTTGCTTATGTAAGTTAGAGATGGCGATTCTAGCGGCTA 554 Query 70391 GAATAGCATAGTCAGGATG 70409 || | ||||| ||||| || Sbjct 553 GAGTGGCATAATCAGGGTG 535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686710017179640