Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04- 25] 23,151 sequences; 12,698,172 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq7869 215 6e-51 >seq7869 Length=1564 Score = 215 bits (238), Expect = 6e-51 Identities = 702/1081 (65%), Gaps = 32/1081 (3%) Strand=Plus/Plus Query 111010 GGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAAC 111069 |||||| || |||||||||| | || ||| || || || |||||||||||||| Sbjct 28 GGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTGAAC 87 Query 111070 ACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAA 111129 ||||||| |||| ||||| |||| |||||| || |||| ||| ||||| || || | Sbjct 88 ACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTA 147 Query 111130 ATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTT 111189 ||| | |||||||||| ||||| ||| ||||||| || | |||||||| | ||| Sbjct 148 ATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAATTT 207 Query 111190 TTCATAATCAAAAGTGCGAGTCTC---------------TTCATTGACATACTTTGGAAG 111234 || | | | ||| ||||| |||| ||| || || || | Sbjct 208 TTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GGTAA 264 Query 111235 GGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTC 111294 ||| | || ||||| || |||||||| || ||||| | ||| ||| || | |||||| Sbjct 265 GGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAATTTC 324 Query 111295 TGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCA 111354 |||||||| || ||| || || || || ||||| ||| || |||| || Sbjct 325 ACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACA 384 Query 111355 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTT 111414 ||||||||||| | | | | || || || || || || || | || | ||| | | Sbjct 385 AGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATA 444 Query 111415 CCAAACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474 ||| | | |||| | | | || | || || || |||||| || || Sbjct 445 CCATAATTTTTGGGCTTTGATAGTC---TTACCACGACCTTCTTTCTCGTAGCGGGTATA 501 Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCT-TGTCTGGACAGA 111533 || || |||||||| ||||| ||| | ||| || || ||| |||| ||| Sbjct 502 TAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAACCAGGAGCTGATGT-TGGAGAGA 560 Query 111534 AAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG 111593 | | | ||| ||| ||| || || |||||||||||||| || |||||||| || | Sbjct 561 ATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAG 620 Query 111594 ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC-TCAAGG 111652 | || | |||||| ||| || || | ||| ||||| || ||| |||| Sbjct 621 CAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCT-TCCTAATATCAATA 679 Query 111653 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCG 111708 || || | ||||| || |||||||| || || || | || | | || |||| Sbjct 680 AAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTT- 738 Query 111709 ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 111768 | ||| | || | ||||| || || ||| || || || |||| ||| ||||| | Sbjct 739 ATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAA 798 Query 111769 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 111828 ||| | || ||| ||||| || ||| ||| | | | | | | |||||| Sbjct 799 ACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGAT 858 Query 111829 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 111888 || | |||||||| ||||| || || || ||||| ||| | | || | || Sbjct 859 ATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTA 918 Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948 || || | ||| ||||||||||| |||| | | ||| ||| |||||| || ||| | Sbjct 919 AATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTT 978 Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCT 112007 ||| ||||| |||||||| | ||||| | |||||| | || ||| || | |||||| Sbjct 979 TGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGT-AAAATATTTTAGAGACATCA 1037 Query 112008 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCA 112067 || || || || || ||| || || ||| ||||||||||| | |||||| | || Sbjct 1038 AGTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCA 1097 Query 112068 T 112068 | Sbjct 1098 T 1098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627850255389600