Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04- 25] 23,151 sequences; 12,698,172 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq7869 141 1e-28 >seq7869 Length=1564 Score = 141 bits (156), Expect = 1e-28 Identities = 634/997 (64%), Gaps = 32/997 (3%) Strand=Plus/Plus Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 118543 ||| || || |||||||| | | || ||| || || || ||||||||||| || Sbjct 28 GGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTGAAC 87 Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAA 118603 ||| | ||||||| | |||||||||||| || || | || || || || || | Sbjct 88 ACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTA 147 Query 118604 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 118663 ||| | ||| || || || |||| ||| || ||||| || | |||||||| | || Sbjct 148 ATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAATTT 207 Query 118664 TTCGTAATCAAAACTGCGAGTCTC---------------TTCATTGACATACTTAGGAAG 118708 || | | | | || ||||| |||| ||| || || || | Sbjct 208 TTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GGTAA 264 Query 118709 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 118768 ||| | || |||| ||||| |||| || ||||| | | | ||| || | |||||| Sbjct 265 GGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAATTTC 324 Query 118769 CGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 118828 ||| |||||||| ||| ||| || ||||| |||||||| || ||| ||||||| Sbjct 325 ACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTTACA 384 Query 118829 CGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 118888 ||||||||||||| | | | || || || || || ||||| | | | ||| | | Sbjct 385 AGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATA 444 Query 118889 CCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTA 118948 ||| | | ||| | ||| || | || || |||| |||||| || || Sbjct 445 CCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGTATA 501 Query 118949 GAGGGCTTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTGGTGCCTTAT-CTGGGCA 119005 || || |||||||| ||||| || | || | | || || | || || ||| | Sbjct 502 TAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGGAGA 558 Query 119006 GAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAG 119065 ||| | | ||| ||| || || || ||||||||||| || || || ||||| || Sbjct 559 GAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAG 618 Query 119066 CGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 119125 || | ||| | ||| | ||| ||| || | || || || | | || | Sbjct 619 AGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAAT 678 Query 119126 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTAC 119181 ||| || | ||||| || ||||| ||||||||||| | || | | ||| ||| Sbjct 679 AAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTT-T 737 Query 119182 GACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGA 119241 | |||| |||||| ||||| | |||||| || || ||||||| ||| ||||| | Sbjct 738 TATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTA 797 Query 119242 TACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGA 119301 ||| | || || ||||| || ||| ||| | | | | | | |||| Sbjct 798 AACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGA 857 Query 119302 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGT 119361 | || | ||||||||| || || || || || || || ||| | | || ||| Sbjct 858 TATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGT 917 Query 119362 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCC 119421 | ||||| ||||| ||||| |||| | || | | ||| || ||||||||||| Sbjct 918 AAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTT 977 Query 119422 TGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTG 119458 | || ||||| || ||||| | ||||| | ||||| Sbjct 978 TTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTG 1014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618256232583560