Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04- 25] 23,151 sequences; 12,698,172 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5489 367 2e-96 seq7869 288 1e-72 seq4177 152 7e-32 >seq5489 Length=2629 Score = 367 bits (406), Expect = 2e-96 Identities = 996/1503 (66%), Gaps = 45/1503 (3%) Strand=Plus/Minus Query 76778 CAATG-TAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTT 76836 ||||| |||| ||||| | || || |||| || || | || |||||||||||||||| Sbjct 1563 CAATGGTAAATTGAATAGCAGCGGAGGCGGCTTGCGTTCTTAAGTAGTACATACCAGTTT 1504 Query 76837 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCG- 76895 ||| |||| |||| |||||||||||||| || || | || | | | ||| | Sbjct 1503 TTAAACCCTTCTTCCAACCGTAGAAATGCATACTAGTAATCTT--ACCCATT--GATGGT 1448 Query 76896 GCTAT-ATGAATA--TTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 76952 ||| | ||| | |||| || ||| ||||||||| | | | |||||| ||| Sbjct 1447 GCTTGCAAGAAAAGATTCAAGGAATGAGACTGATCGATGTAGATGGCACGATCAGCAGCC 1388 Query 76953 ATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCA 77012 || || |||||||||||||||| |||||||| | |||||| | | || || | || Sbjct 1387 ATATTGATAATGGTCTTTTGAGAGATTTCCCAGACGGTTTTGTATAATTCCTTCAATTCT 1328 Query 77013 TCTGGAAGGTTTG-TATT--TTGAATGGAACCACCATCTGATATAATTG--TATTCTTT- 77066 | ||| | |||| || |||||| |||||| | || ||||| |||| ||| Sbjct 1327 TGTGGCACATTTGGTAAGCCTTGAATAGAACCATTTTGTG---TAATTAGATATTGTTTC 1271 Query 77067 ATATCATCATTCCACAATTTCCTC-TCTGTTAAAACTCTAAGGAGATGAGGATTAACTAT 77125 ||| ||||| ||| ||| || || |||| | | || | || |||||||| | Sbjct 1270 ATACTATCATCCCA-AATGCCCAGGTCGACTAAATCACGTAGTAAATATGGATTAACAAC 1212 Query 77126 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 77185 ||| ||||| ||||||| || | ||||| ||| || || ||| |||||| | | Sbjct 1211 TTGGAATTCACCAGACAGGACACGACGAGAGTACATGTTTGAGGTCACTGGTTCGAAGCA 1152 Query 77186 TTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACT 77245 |||||| | || | |||||| | ||| || || |||||||| ||||||| ||| Sbjct 1151 TTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCATAGTCAAAGA 1092 Query 77246 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 77305 ||||| | |||||| | || | | | ||| || ||||||||| | | | Sbjct 1091 GTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTTTCCCAATCCCACATGCCAAA 1032 Query 77306 AGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATA 77365 ||| | | | ||| | |||| |||||| ||| || || ||| || || | | | Sbjct 1031 TGGTTTAGCGTTCCACATATCGAATTGTAAAATACCCTTGGAAGCTGGAGAACCTTCAAA 972 Query 77366 TGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATA 77425 || ||| |||||| ||| || | |||||| ||||| | | | | || Sbjct 971 AGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGAGTAGCATGGTA 912 Query 77426 AATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATA-AT 77484 ||| |||||||| || | || || ||| ||| ||||| | | || || || || | Sbjct 911 AATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCT-TCCGATTCAAAGGGTAGAC 853 Query 77485 GTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCT 77544 | || | ||| | | ||| || || ||||| || |||| | ||||||||||||| || Sbjct 852 GCAACATCATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGTCTATGCTTCA 793 Query 77545 TATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGAT 77604 |||| ||| || |||| || |||| ||||| |||||| ||| |||| | | || | | Sbjct 792 TATTTGAATTTCTAGCCTCGGGAACTGGATAGTAATTACGGTCGATAACTCTGTTCAAGT 733 Query 77605 TTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTATAA 77664 | | || |||||| | | || | | | | |||| | | ||| || | || Sbjct 732 TGTGAGTAATGACTTTAGCAATCTCGTGCAATCTCTCGAAATTATAGCTTGCAGTTTTAC 673 Query 77665 CA--------------AAC--ATGTTCAAAG--CTATAGATGCTAGATTACAAACTGCTA 77706 || ||| ||| | || | ||||| |||| |||||||||||| Sbjct 672 CATCTTCTGAAACCTCAACGAATGCTGGTAGGGCAATAGAAGCTAAATTACAAACTGCAG 613 Query 77707 CCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGC 77766 |||| || | || ||||| | || || ||||| |||| |||||||||| | Sbjct 612 TTTCATCAGGGGAGGAATATTCGACGATTTCACAACATAAATTAGATGATTTGATAGTAC 553 Query 77767 CCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCC 77826 | | || |||||||| |||| | || |||| ||||||||||| || || || || | Sbjct 552 CTAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTATAAACCATGAAAGGTGTAC 493 Query 77827 CGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATT 77886 | ||||| |||||| || | ||| | | ||| | ||| | | || | || | || Sbjct 492 CTGTTTCTGTCTGTGCTTGCAAAATGGCATACCACA--ACTTTTGGGCTT-TAATTGTTT 436 Query 77887 TGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACAT 77946 | || | |||||||| || |||||||||| |||||||||||| ||||| |||| Sbjct 435 TACCACGACCTTCTCTTTCGTAACGAGTATATAGTTCTTCAAATTCATCGCCCCACACAT 376 Query 77947 CATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTC 78006 |||| || || ||| || | || | | ||| | ||| ||||| || | ||| | Sbjct 375 CATCTAAACCTGGGGCAGCACTGGGCGAAAACAAAGTCCAAGGCCCATCCTCTTGAACAC 316 Query 78007 GTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTT 78066 ||||||| || || ||||| |||||||||||| || | ||||| | | | ||||| Sbjct 315 GTTTCATGAAAAGGTCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTT 256 Query 78067 CATTTCC-TGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCT 78125 | || || ||| || ||| | | ||||| ||| || | ||||| | ||||||||| || Sbjct 255 CCTTACCATGTGTT-TTTCTGATATCGACAAAGTCGAAGATATCTGCATGCCATGGCTCC 197 Query 78126 AGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTG 78185 | | | || | | | ||||||| || ||||| ||||| || | ||| | ||| ||| Sbjct 196 AAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAACGGGCAGTG 137 Query 78186 TTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATA 78245 ||||| |||| | | ||| ||||| | ||||| || || || || || |||| ||| Sbjct 136 TTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAGCGATA 77 Query 78246 TAA 78248 ||| Sbjct 76 TAA 74 >seq7869 Length=1564 Score = 288 bits (318), Expect = 1e-72 Identities = 616/916 (67%), Gaps = 16/916 (2%) Strand=Plus/Plus Query 77979 AATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCA 78038 |||| |||| |||| ||| | || || ||||| || |||||||| |||||||||||| Sbjct 563 AATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCA 622 Query 78039 ATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAAC 78098 || | ||||| | | | ||| || || || ||||| ||| ||| | ||| Sbjct 623 GGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAA 682 Query 78099 TCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTA 78158 || | ||||||| |||||||||||| || || | || | | ||||||| ||||||| Sbjct 683 TCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTA 742 Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 || ||||| || | ||| | ||| |||||||| |||| | | ||| ||||| | |||| Sbjct 743 CCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCG 802 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 ||||| || || ||||| |||| ||| ||| ||| ||| ||||| || |||||| Sbjct 803 TTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTT----ATGGAT 858 Query 78279 AT----CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTA 78334 || || || || || || | || || || | ||| || ||||| || ||||| Sbjct 859 ATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTA 918 Query 78335 GATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATG 78394 || ||||| ||| ||| ||| ||||| || | ||||| ||||||||| | | Sbjct 919 AATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTT 978 Query 78395 AACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAG 78454 ||| || ||||| || || || ||||| || || ||||| ||||| ||| | | Sbjct 979 TGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAA 1038 Query 78455 ATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCAT 78514 || || ||||| | ||| | || || || | || || |||| || || | ||| Sbjct 1039 GTTATACGTTTCTAAAGCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCAT 1098 Query 78515 CAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 78574 | | ||| || || | ||| || | | || ||| | | || || || ||| Sbjct 1099 AATTAAATGTTGTGGACGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTC 1158 Query 78575 CAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAGTCTCTCTCGTAAATAATAACAGAAT 78633 ||||||||||||||||||||| |||| |||||| ||||| || || | ||| | || | Sbjct 1159 CAAAGTTTTAAAACCAAAATAACTGTACTGAAAA-TCTCTGTCATAGACAATTGCGGAGT 1217 Query 78634 TTAGTTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTTGAAATAATAGGAGATC 78693 | | |||||| |||| || | ||||||| |||| | || || || |||| Sbjct 1218 TCAATTTATCCTTGTTTTCCATGACAATATTGTAGACATCATCAGAGATCATGGGAGCAG 1277 Query 78694 GTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtt 78753 | |||| | || ||| || || || | | |||||| | || | | |||| ||| Sbjct 1278 GCTTACCAGTAGCAGCATTGACGTATCTATAAAGATCTTCGACAACCTTAGAAAATTGTT 1337 Query 78754 tttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAG 78813 || | |||| || |||| |||||| | || ||||| || ||||| | || ||||| | Sbjct 1338 TTGTGGTTTGTTTATGTAAATTAGAAATGGCAATTCTGGCCGCTAGGGTGGCGTAATCTG 1397 Query 78814 GATGTTGTGTAG---TACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAG 78870 |||| |||| || ||| | || |||| || ||||| | |||| || || | Sbjct 1398 GATGAACAGTAGTCATATAAGCGCATG---TTTCAGCGGCTAAGTTGTCTAGTTCGATTG 1454 Query 78871 TTGTGACCCCATTATA 78886 ||||||| || | ||| Sbjct 1455 TTGTGACACCTTCATA 1470 >seq4177 Length=3506 Score = 152 bits (168), Expect = 7e-32 Identities = 579/901 (64%), Gaps = 17/901 (2%) Strand=Plus/Minus Query 47830 CTTGAGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTT 47889 |||| |||||||| || ||||| || ||| || | || ||||| || ||||| | Sbjct 3394 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 3336 Query 47890 TGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttt 47949 | || |||| || || |||||||| ||||| || || || | | || || ||| | Sbjct 3335 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 3276 Query 47950 tAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTT 48009 | || || | | |||||| || || ||||| || | ||| ||||| | | Sbjct 3275 TGTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGT 3216 Query 48010 CACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATA 48068 || ||||| |||| | |||||||| || ||| ||| | || |||||| || Sbjct 3215 CAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCCAAGAAGTATCT-TTGTTCAATT 3157 Query 48069 GTGACAGCATCC---ACTATTATCGATGTTACCGTTTCCTCACT-TGGTGGATACAACAA 48124 ||||| || || ||| | | | || | || | |||| | | ||| Sbjct 3156 TCCACAGCCTCGGTGACAATTTTT----TCAACGATGGCTGGGTCTGGTTTGTTCTTCAA 3101 Query 48125 ATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTC 48184 ||| |||| || |||||||| || || | |||||| ||||||| || ||||| Sbjct 3100 ATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTC 3041 Query 48185 GTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAA 48244 ||| ||||| || | ||||||||| | || | ||||| | ||| || || | || || Sbjct 3040 GTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAA 2981 Query 48245 AGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACT 48304 || || || || || | ||||| | || ||||| || ||||| || || | Sbjct 2980 GGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAA 2921 Query 48305 GGCTTC---GTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCAT 48361 ||| || || || ||||| | | ||||| || ||||||| | || || Sbjct 2920 GGCGTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGAT 2861 Query 48362 TGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTAT 48421 || | || ||||| || | || | |||| || || || | ||||||||| || Sbjct 2860 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGAT 2801 Query 48422 TAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACA 48481 || | || |||| ||||||||||||||||| || || || ||||| |||| Sbjct 2800 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 2741 Query 48482 TCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTAT 48541 | || |||| || || || || || | || |||| |||| || ||||| || || Sbjct 2740 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 2681 Query 48542 TCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGT 48601 || ||| ||| || ||||| || | || ||| ||| || | ||||| | Sbjct 2680 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTT 2621 Query 48602 CAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAA 48658 || | || |||||||||| |||||| || || | ||| | ||||||||| ||||| || Sbjct 2620 CATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAA 2561 Query 48659 TGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAAC 48718 || || || || || || | ||| || ||| ||| | ||| ||||||| ||| Sbjct 2560 AGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAAC 2501 Query 48719 A 48719 | Sbjct 2500 A 2500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694467771532640