Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04-
27] 11,280 sequences; 13,094,546 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq6460 91.5 2e-13
seq4 89.7 8e-13
>seq6460
Length=11281
Score = 91.5 bits (100), Expect = 2e-13
Identities = 160/225 (71%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 70033 TTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATT 70092
||| ||| | | || |||| || || ||| || ||||||||||| || ||||||||
Sbjct 3475 TTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTACGGATT 3416
Query 70093 CCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC-TGCGA-GACAGACTATTCGGGTCAG 70150
|| |||||||| | || | || || |||| ||||| ||| |||||| | || ||
Sbjct 3415 TCAATGGAGGCATTTTGGTGCTAAATACA-AGACGTGCGATGAC-GACTATACTGGACAA 3358
Query 70151 GGTGTTGATCAATTGCAGACA-ATCATTGACACTCTCAAGACCAATCCAACAGATAGGAG 70209
||| ||||||||||| | ||| | ||| | | || ||||| ||||| ||||| ||
Sbjct 3357 GGTATTGATCAATTG-AAACAGGTTATTCATAAACTAAAGACAAATCCCTACGATAGAAG 3299
Query 70210 GATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGC 70254
||| | ||| | | ||||| || || ||||| || |||||||
Sbjct 3298 AATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGC 3254
>seq4
Length=10810
Score = 89.7 bits (98), Expect = 8e-13
Identities = 310/475 (65%), Gaps = 13/475 (3%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| || |||||| | || || || | ||| | ||| ||||||| ||||| || ||
Sbjct 5884 CAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGAT 5825
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA---CGAGCCAGG 96992
| ||||| ||||| || || | || ||| || | |||||| | || || ||
Sbjct 5824 ATCTTTGATTTTATTGATATTAGGAAGAACCACGG---TAAAGAGGAAATTCGTGCAAGA 5768
Query 96993 GACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGC 97052
|| ||||| ||| || ||| | || ||| | ||||||||||| ||| | || |||
Sbjct 5767 GATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGG 5708
Query 97053 TACTGGAGCCTAATGTGCCCCGAC-TCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGA 97111
||||| | | || | || || || | || ||| | |||||| | || || ||
Sbjct 5707 ACCTGGA-CATTATTCTCTCCAACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGA 5649
Query 97112 GTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGC 97171
||||||||| || || ||||||| |||| || || || |||| | || | ||
Sbjct 5648 GTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCG--TGGTAAGACTA-TCAAAGC 5592
Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231
| | || | ||| | |||| || ||||| || ||||| || || | | || |
Sbjct 5591 CCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGT 5532
Query 97232 CTACAAGGATACCGTGAATCGCAACAGC-AACCAACGCCACTTGGGCACCATCAAGGGCT 97290
||||||||| | || | | || | | || ||| |||| || ||||||| |
Sbjct 5531 TTACAAGGAT-GCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCAT 5473
Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345
| || | ||| |||||||| || ||| | |||| || || || || |||||
Sbjct 5472 CAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTG 5418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740954710652800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |