Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04- 27] 11,280 sequences; 13,094,546 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq7206 96.9 4e-15 >seq7206 Length=17375 Score = 96.9 bits (106), Expect = 4e-15 Identities = 345/526 (66%), Gaps = 34/526 (6%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||||| || |||| | ||||| ||||| || ||||| || | Sbjct 125 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 184 Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903 ||| || || | ||| | | || || || | | | || || || ||| | || Sbjct 185 CAAGGAGAT-GTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTAC 243 Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961 ||| |||| ||| | ||| || || || || || | ||| || ||| || || Sbjct 244 CGAAAGCAAC-----CAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 298 Query 92962 ACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAA--ATCTTTCT-CGAT 93018 | ||||| ||||| | | || |||| ||||| |||||| |||||| | | || Sbjct 299 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAAT 355 Query 93019 TACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATT--TGG---TGGTTT-TTGTAC 93072 | | || || || | | |||| | || || || ||| |||||| || | | Sbjct 356 TTCCACAGCCTCGGTGACAATTTTT-----TCAACGATGGCTGGGTCTGGTTTGTTCTTC 410 Query 93073 GACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAA 93132 | || | ||| ||||| ||||||||||| || ||||||||||||| | ||||| Sbjct 411 AA-ATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAA 469 Query 93133 CTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGC 93192 || ||| || |||||||| || | || |||| || || | ||| || || || || Sbjct 470 TTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGC 529 Query 93193 AAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA 93252 ||| ||| || ||||| | |||||| | || ||||| || || | | ||| |||| Sbjct 530 AAAGGAACCCGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAA 589 Query 93253 ATTTGCGGAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTT 93297 ||| | | || |||||| |||||||||| ||||| || Sbjct 590 CAAGGCGTCA-GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTT 634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556782282627200