Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04- 27] 11,280 sequences; 13,094,546 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq3770 158 5e-34 seq4725 147 1e-30 >seq3770 Length=644 Score = 158 bits (174), Expect = 5e-34 Identities = 288/417 (69%), Gaps = 10/417 (2%) Strand=Plus/Plus Query 58400 GCAGCTTAGGCAACCTTCCACTTCCGTGCCTTCTA---CCGACTTAGCAGAGGTTCGGAT 58456 |||||| | |||||| || || |||||||| || | || || | | |||| ||||| Sbjct 98 GCAGCTGACGCAACCCTCGACCTCCGTGCCCTCCAGGGCCATCTGA-CGGAGG--CGGAT 154 Query 58457 GTAGTACAGAGACTTCAGGCCCTTCTTGTGAGCGTAGATCTGCGCTCGGTTAATGTCTCG 58516 |||||| || | ||| | |||||| |||||||||||||| ||||| | ||| || Sbjct 155 GTAGTAGAGCGTCTTGATGCCCTTGCGCCACGCGTAGATCTGCGCGCGGTTGACGTCGCG 214 Query 58517 CGTTGTCGCTGTATCTGGGAAGAACAGCGTGAGAGACATGCCCTGGTCTACCCAAGGAGA 58576 ||| || | || || ||||||||||||||| || |||||||| || | | Sbjct 215 CGTCGTGACCGTGTCCTTGAAGAACAGCGTGAGGCTCAGACCCTGGTCGACGTGCTGCGT 274 Query 58577 TGCTACAGCGTACATATCAATGATCGGGT--TAGGTCCGATAGCGTAAGCGCTATCAATT 58634 || | |||||| | || |||||| | ||| ||||| |||| ||| || Sbjct 275 CGCGGCGGCGTACGTGTCGATGATCTTCTCGTAG--CCGATCTCGTACGCGTCCTCGTAG 332 Query 58635 GATTCTACATTCTCATTGGTCACTCCGTACTGAGGGTAATAGACTCGACCAAGCTTACCC 58694 | || | || || || |||| | | ||||| ||||| || || | ||| ||| Sbjct 333 TACTCGAGGTTGTCGTTCGTCAGGTAGGGCGCCGGGTAGTAGACGCGCCCGATCTTGCCC 392 Query 58695 TCCTTGCGAACCTCAACAGGAGAGGTCACAGGGTGAATCGAGGCCGTGGCATGGTTAATG 58754 |||||||| | ||| | || | ||| ||||| ||||||| ||| | | ||| ||| Sbjct 393 TCCTTGCGGATCTCGATCTTCGACGGCACCGGGTGGATCGAGGACGTCGAGTTGTTGATG 452 Query 58755 TACGAGATAGAGCCGGTTGGTGGGATCGCCTGGAGGTTCTGGTTGTAAATACCATGC 58811 || ||||| ||||| || || |||| |||||||||||||||||||| || || ||| Sbjct 453 TAGGAGATCGAGCCCGTCGGCGGGACGGCCTGGAGGTTCTGGTTGTAGATCCCGTGC 509 >seq4725 Length=255 Score = 147 bits (162), Expect = 1e-30 Identities = 188/257 (73%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 60159 GAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACGCTTGGTATCCAGGAACGCA 60218 || || ||||| || |||||||||||||| ||||| || |||||||| || |||||| Sbjct 255 GACAGCGTCTTGATGCGGATCTTCTCGTCCGCGTTCTCGCGCTTGGTGTCGAGGAACCGC 196 Query 60219 AGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTGCGCCCTGCCTTGCACCCAGT 60278 | ||||||||||||||| |||| || || || || || |||||||| | || || || Sbjct 195 ATGATGTCGGGGTGGTGCGCGTGCAGGTACACGGCACCGGCGCCCTGGCGCGCGCCGAGC 136 Query 60279 TGGTTAGAGTAGGAGAAGCTATCTTCTAGAATCTTCATCACAGGGATGACTCCAGAGGCC 60338 ||||| | ||||||||| || || || | ||||||||| |||||||| || || | | Sbjct 135 TGGTTCGCGTAGGAGAACGAGTCCTCGAGCAGCTTCATCACGGGGATGACGCCGGACGAC 76 Query 60339 TGACCTTCTCGA--CCCTTAATCGGAGCTCCTGCCTCGCGGAGGTTGGAGAATCCAATGC 60396 || ||||||| ||| || || || || |||||||| ||| || | | | Sbjct 75 TG--GTTCTCGATGTGCTTGATGGGCGCGCCGTGCTCGCGGATGTTCGACAGGAGCAGGG 18 Query 60397 CGACTCCGCCACCACGC 60413 |||| ||||| || ||| Sbjct 17 CGACGCCGCCGCCGCGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225696968043200