Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04-
27] 11,280 sequences; 13,094,546 total letters
Query= NC_011273.1
Length=164602
Score E
Sequences producing significant alignments: (Bits) Value
seq10065 298 6e-76
seq10360 188 8e-43
seq9298 174 2e-38
seq1887 132 5e-26
>seq10065
Length=275
Score = 298 bits (330), Expect = 6e-76
Identities = 230/273 (84%), Gaps = 0/273 (0%)
Strand=Plus/Minus
Query 156115 ACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACGAG 156174
|| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| |||||||||
Sbjct 275 ACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAG 216
Query 156175 GAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTACTCGAAC 156234
|| |||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 215 GAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCG 156
Query 156235 ATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGAGGAG 156294
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 155 ATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGAG 96
Query 156295 AACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGACGACCCG 156354
||| | ||||| ||| ||||| |||||||| | ||||||||| || ||| |||
Sbjct 95 AACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGCCG 36
Query 156355 CTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAG 156387
||||||||||||||||| ||||||||| |||
Sbjct 35 CTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAG 3
>seq10360
Length=215
Score = 188 bits (208), Expect = 8e-43
Identities = 164/202 (81%), Gaps = 4/202 (2%)
Strand=Plus/Plus
Query 156562 GAACTCAAGGACTACACCTATGAGCTGCTGTTCGAGCTGTTCGACAACGAGCAGGAGTAC 156621
|| ||||||| ||||| | |||||||| |||||||||| ||| |||||| | |||||
Sbjct 16 GAGCTCAAGGCGTACACGTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAGGTGCAGTAC 75
Query 156622 ACCCAGGACCTCTACGACGCCACCGGCCAGACCGAGGACGTGAAGAAGTTCCTGCGGTAC 156681
|| ||||||||||||||| | ||| | |||||||||||| ||||||||||||||||||
Sbjct 76 ACGGAGGACCTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGCGGTAC 135
Query 156682 AACGGCAACAAGGCCCTGCAGAACCTGGGCTACGACGCGCTGTTCAGCCGCAG--CGACT 156739
|||| ||||||||| || |||||| |||||||| ||||| ||| || || |||
Sbjct 136 AACGCCAACAAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTC--CCCAAGGACGAGA 193
Query 156740 GCGACGTCAACCCGGCCATCCT 156761
||||||||||||||| |||||
Sbjct 194 CCGACGTCAACCCGGCGATCCT 215
>seq9298
Length=157
Score = 174 bits (192), Expect = 2e-38
Identities = 128/149 (86%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 153093 GGCCAGCAGGCACCCACCGGGCACATCCCGTTCACCGACCGCTCCAAGCGCGTCCTGGAG 153152
||||||||||| || | | |||||||||||||||| ||| ||||| || || |||
Sbjct 2 GGCCAGCAGGCCCCGAGCTGGCACATCCCGTTCACGCCGCGCGCCAAGAAGGTGCTCGAG 61
Query 153153 CTGTCGCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCATCTCCTG 153212
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 62 CTGTCGCTGCGCGAGGCGCTCCAGCTCGGCCACAACTACATCGGCACCGAGCACATCCTG 121
Query 153213 CTGGCCCTGATCCGCGAGGGTGAGGGCGT 153241
|| | ||| ||||||||||| ||||||||
Sbjct 122 CTCGGCCTCATCCGCGAGGGCGAGGGCGT 150
>seq1887
Length=154
Score = 132 bits (146), Expect = 5e-26
Identities = 109/133 (82%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 156741 CGACGTCAACCCGGCCATCCTGAGCGCGCTGTCGCCCGGTGGAGACGAGAACCACGACTT 156800
||||||||||||||| ||||| ||||||||||| | |||||||||||||||||
Sbjct 22 CGACGTCAACCCGGCGATCCTCTCGGCGCTGTCGCCGAACGCCGACGAGAACCACGACTT 81
Query 156801 CTTCTCGGGGTCGGGCAGCACGTACGTCATGGCCAAGGGTGTGGTCACCGAAGACGACGA 156860
|||||| ||||| ||| |||||||||| | ||||| ||| |||||| ||||||||
Sbjct 82 CTTCTCCGGGTCCGGCTCGTCGTACGTCATCGGCAAGGCCGTGAACACCGAGGACGACGA 141
Query 156861 CTGGGACTTCTGA 156873
|||||||||||||
Sbjct 142 CTGGGACTTCTGA 154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 526524149625600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |