Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04- 27] 11,280 sequences; 13,094,546 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq10065 298 6e-76 seq10360 188 8e-43 seq9298 174 2e-38 seq1887 132 5e-26 >seq10065 Length=275 Score = 298 bits (330), Expect = 6e-76 Identities = 230/273 (84%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 156115 ACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACGAG 156174 || ||||||||||| ||||||||||| ||||||||||| ||||| ||||| ||||||||| Sbjct 275 ACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAG 216 Query 156175 GAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTACTCGAAC 156234 || |||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 215 GAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCG 156 Query 156235 ATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGAGGAG 156294 ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct 155 ATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGAG 96 Query 156295 AACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGACGACCCG 156354 ||| | ||||| ||| ||||| |||||||| | ||||||||| || ||| ||| Sbjct 95 AACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGCCG 36 Query 156355 CTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAG 156387 ||||||||||||||||| ||||||||| ||| Sbjct 35 CTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAG 3 >seq10360 Length=215 Score = 188 bits (208), Expect = 8e-43 Identities = 164/202 (81%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 156562 GAACTCAAGGACTACACCTATGAGCTGCTGTTCGAGCTGTTCGACAACGAGCAGGAGTAC 156621 || ||||||| ||||| | |||||||| |||||||||| ||| |||||| | ||||| Sbjct 16 GAGCTCAAGGCGTACACGTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAGGTGCAGTAC 75 Query 156622 ACCCAGGACCTCTACGACGCCACCGGCCAGACCGAGGACGTGAAGAAGTTCCTGCGGTAC 156681 || ||||||||||||||| | ||| | |||||||||||| |||||||||||||||||| Sbjct 76 ACGGAGGACCTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGCGGTAC 135 Query 156682 AACGGCAACAAGGCCCTGCAGAACCTGGGCTACGACGCGCTGTTCAGCCGCAG--CGACT 156739 |||| ||||||||| || |||||| |||||||| ||||| ||| || || ||| Sbjct 136 AACGCCAACAAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTC--CCCAAGGACGAGA 193 Query 156740 GCGACGTCAACCCGGCCATCCT 156761 ||||||||||||||| ||||| Sbjct 194 CCGACGTCAACCCGGCGATCCT 215 >seq9298 Length=157 Score = 174 bits (192), Expect = 2e-38 Identities = 128/149 (86%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 153093 GGCCAGCAGGCACCCACCGGGCACATCCCGTTCACCGACCGCTCCAAGCGCGTCCTGGAG 153152 ||||||||||| || | | |||||||||||||||| ||| ||||| || || ||| Sbjct 2 GGCCAGCAGGCCCCGAGCTGGCACATCCCGTTCACGCCGCGCGCCAAGAAGGTGCTCGAG 61 Query 153153 CTGTCGCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCATCTCCTG 153212 |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 62 CTGTCGCTGCGCGAGGCGCTCCAGCTCGGCCACAACTACATCGGCACCGAGCACATCCTG 121 Query 153213 CTGGCCCTGATCCGCGAGGGTGAGGGCGT 153241 || | ||| ||||||||||| |||||||| Sbjct 122 CTCGGCCTCATCCGCGAGGGCGAGGGCGT 150 >seq1887 Length=154 Score = 132 bits (146), Expect = 5e-26 Identities = 109/133 (82%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 156741 CGACGTCAACCCGGCCATCCTGAGCGCGCTGTCGCCCGGTGGAGACGAGAACCACGACTT 156800 ||||||||||||||| ||||| ||||||||||| | ||||||||||||||||| Sbjct 22 CGACGTCAACCCGGCGATCCTCTCGGCGCTGTCGCCGAACGCCGACGAGAACCACGACTT 81 Query 156801 CTTCTCGGGGTCGGGCAGCACGTACGTCATGGCCAAGGGTGTGGTCACCGAAGACGACGA 156860 |||||| ||||| ||| |||||||||| | ||||| ||| |||||| |||||||| Sbjct 82 CTTCTCCGGGTCCGGCTCGTCGTACGTCATCGGCAAGGCCGTGAACACCGAGGACGACGA 141 Query 156861 CTGGGACTTCTGA 156873 ||||||||||||| Sbjct 142 CTGGGACTTCTGA 154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526524149625600