Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04- 27] 11,280 sequences; 13,094,546 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq9589 104 2e-17 seq1805 84.2 2e-11 >seq9589 Length=17947 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || || | | || |||||||| ||||||||||| | Sbjct 12077 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 12136 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || || || ||||||| | |||| | | |||||| || ||||| Sbjct 12137 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 12196 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| |||||| || | | || | ||||||| || || ||| Sbjct 12197 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 12256 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||||| |||| ||| || ||||| |||||||| Sbjct 12257 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 12303 Score = 100 bits (110), Expect = 3e-16 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470 ||||| | | |||||||| ||||||||||| || || || | ||| || || || Sbjct 12328 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 12387 Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530 ||||||| | |||| | | ||||| || ||||| |||||||| ||||| ||| ||| Sbjct 12388 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC-TTGAATTT 12446 Query 138531 TTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCA 138588 | | |||| ||| || | ||| |||| || || || || | || | |||||||| Sbjct 12447 TCGACTTAACGTTG-TCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCG 12505 Query 138589 GTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| ||| || || ||||||||||| Sbjct 12506 GTCAAAGTCTTGACGAAAATCTGCAT 12531 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || | || | | || |||||||| ||||||||||| | Sbjct 11621 CCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 11680 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || ||||| ||||| | | | || | | |||||| |||||||| Sbjct 11681 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 11740 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||||||||| || ||| |||| |||| | ||| || | ||||||| || || | Sbjct 11741 ATACCTTCTTTATC-TTGAATTTTACTTTTGACGTTG-TCAATAGTGTCGGAAGATTCAA 11798 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || || || |||||||| || ||||| ||||| Sbjct 11799 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 11847 >seq1805 Length=14085 Score = 84.2 bits (92), Expect = 2e-11 Identities = 312/484 (64%), Gaps = 14/484 (3%) Strand=Plus/Plus Query 153087 GGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCC 153146 ||||| ||| |||| |||| || || ||||| | || | ||||| ||||| ||| Sbjct 7049 GGTTCGAAGCATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCC 7108 Query 153147 ACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 | |||||| || | || || || |||||| | | || | | ||||||| Sbjct 7109 ATAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAAGGTTTCCCAATCC 7168 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGT--AACACTCCTCGACTGGCGG 153264 |||| | | ||| | ||||||||||| ||| | ||| || || | | || || | Sbjct 7169 CACATGCCAAATGGTTTAGCGTTCCACATATCGAATTGTAAAATACCCTTGGA--AGCTG 7226 Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGA 153324 || || |||| ||| || | || || |||||||| ||| ||| || || | Sbjct 7227 GAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAA 7286 Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCT 153384 | | ||| ||| || |||||| ||||||||| || ||| |||||||| | Sbjct 7287 GAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTCCGATT 7346 Query 153385 CGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGG 153444 | | || | |||| || || | | | ||||||| ||||||| ||| | | || | Sbjct 7347 CAAAGGGTAGACGCAACATCATATAAGTATCGGCCAAGCCCTGGACACCAAGAGCAATAG 7406 Query 153445 GTCGATGCTTC-TCGTTG--CTGC--GCCTCGCGCTCGCTATGGGATAGTGATTGCGATC 153499 ||| ||||||| | ||| | | |||||| | | ||||||| ||| || || Sbjct 7407 GTCTATGCTTCATATTTGAATTTCTAGCCTCG-----GGAACTGGATAGTAATTACGGTC 7461 Query 153500 GATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATC 153559 ||||| | |||| | |||| | | ||||||| ||| | | | | ||||||||| Sbjct 7462 GATAACTCTGTTCAAGTTGTGAGTAATGACTTTAGCAATCTCGTGCAATCTCTCGAAATT 7521 Query 153560 ATAG 153563 |||| Sbjct 7522 ATAG 7525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496192427001600