Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04- 27] 11,280 sequences; 13,094,546 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq8943 325 1e-84 seq6176 279 2e-70 seq10370 181 3e-41 seq5848 127 7e-25 seq9295 98.7 3e-16 seq10901 95.1 4e-15 seq8563 91.5 5e-14 >seq8943 Length=399 Score = 325 bits (360), Expect = 1e-84 Identities = 311/398 (78%), Gaps = 0/398 (0%) Strand=Plus/Minus Query 39675 AGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGATCGGCGTGATCGCCTGCTGCCCG 39734 |||||||||| |||| || | | ||| |||||||| ||| |||| |||| ||||| Sbjct 398 AGGATCTCCGCGAGGGGCTGCTCGAGCTCCGGGTGGATGGGCTCGATCTTCTGCAGCCCG 339 Query 39735 TTCTTACGGAGGGCGTAGTTCGTGTGAGACCCCACGCCCATCGGACCCGGACGGTACAGC 39794 ||||| || || |||||||||||||| || || ||||||||| ||||| ||||||||| Sbjct 338 TTCTTGCGCAGCGCGTAGTTCGTGTGCGAGTTCATGCCCATCGGGCCCGGGCGGTACAGC 279 Query 39795 GCGACGACGGCCGAGATGTCCTCGAAGTTGTCCGGCTTCAGCAGACGGAGCAGTGAGCGC 39854 |||| ||||||||||| ||| ||||| ||||||||||||| | | || || || | |||| Sbjct 278 GCGATGACGGCCGAGAGGTCGTCGAACTTGTCCGGCTTCATCTGGCGCAGGAGCGCGCGC 219 Query 39855 ATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGTCGCCCCTGGCCAGCAGCTCGTAC 39914 || | |||||||||||||||||| || ||||||||| || | || |||||||||||| Sbjct 218 ATGGGGCCGCCGTCGAGCTGGAACACGCCGAGCGTGTCACCGCGCGCGAGCAGCTCGTAC 159 Query 39915 GTCGCGGGGTCGTCCAGGGGGATGTTCTCCAGGTCGACGTGCTCCCCACGGTTGAGGCGG 39974 | ||| |||||| || | || ||| | |||| ||||| | ||| | | Sbjct 158 GACGCCTTGTCGTCGAGCGTGAGCGACTCGATCTCGATCGGCTCCTTGCCGTTCATCTCG 99 Query 39975 ATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCGAGGAAGTCCATCTTC 40034 |||||||||| ||||||| | | ||||||||||||||| |||||||||||||||||||| Sbjct 98 ATGTTCTCGAGCGCGTCGTCGAGGATCGTGAGGTTCCGCAGCCCGAGGAAGTCCATCTTG 39 Query 40035 AGCAGGCCCAGAGCCTCGCAGCTCGGGTAGTCGAACTG 40072 | ||||| || ||||| | |||||||||||||||| Sbjct 38 ATGAGGCCGAGGCCCTCGGACGTCGGGTAGTCGAACTG 1 >seq6176 Length=304 Score = 279 bits (308), Expect = 2e-70 Identities = 243/302 (80%), Gaps = 0/302 (0%) Strand=Plus/Minus Query 39389 CGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCGTAGCC 39448 |||||| | |||||| | ||| |||||| | || |||||||||||||||||||||||||| Sbjct 304 CGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCGTAGCC 245 Query 39449 AGCGAACGGGACCAGCACGTCCCACACTGCCTGGATGGCACCGTCCGAGTAGCCTCGCTC 39508 ||||||||||||||| |||||| || |||||||| || |||| ||||| || ||||| Sbjct 244 CGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTCGGAGTACCCGCGCTC 185 Query 39509 GCGCGCTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCC 39568 || ||| |||||| ||||||||||||| | || | ||| |||||||||||| Sbjct 184 CCGGCAGCCCGCCTGGAACGGCACGAACTCCTTGTCGAGGATCTCCTTCTTCTTCTTGCC 125 Query 39569 CATCGCCCGGCGAAGCAGGTCGGCCTGACCGAGGGTGTACCCGGCCATGACCTGCGCAAC 39628 |||||| || || |||||||||||||| ||||| | ||||||||| | || |||||| | Sbjct 124 CATCGCGCGCCGCAGCAGGTCGGCCTGTCCGAGCGAGTACCCGGCGAGGATCTGCGCGGC 65 Query 39629 CTTCTGCACCTGCTCCTGGTAGATGATGAGCTGGAAGGTCGGGTCCAGGATCTCCGACAG 39688 | |||| |||||||||||||||| |||||| | ||||| ||| |||||||||| || Sbjct 64 CCTCTGGACCTGCTCCTGGTAGACGATGAGGCCGTAGGTCTCGTCGAGGATCTCCGCGAG 5 Query 39689 GG 39690 || Sbjct 4 GG 3 >seq10370 Length=172 Score = 181 bits (200), Expect = 3e-41 Identities = 138/163 (85%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 40452 CCGTACTTCCGGGTGACGTACTGGATCACCTCGCCACGACGCCGGTCATCGAAGTCGATG 40511 ||||||||| ||||||||| |||| ||||| || || || || || |||||||||| | Sbjct 2 CCGTACTTCTCCGTGACGTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAAGTCGACG 61 Query 40512 TCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGTCCGTGC 40571 ||||| |||||||| ||||| ||||||||||| ||||||||||||||||| || |||||| Sbjct 62 TCGACGTCGGGCATCGACACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAGCCCGTGC 121 Query 40572 TCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCA 40614 |||||||||||||| |||||||| || | || ||||| | ||| Sbjct 122 TCCAGCGGGTCGAGCTCGGTGATGCCCATGAGGTAGGAGGCCA 164 >seq5848 Length=556 Score = 127 bits (140), Expect = 7e-25 Identities = 149/200 (75%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 40668 GCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGGATGATC 40727 |||||| ||||||||| ||||| |||||||||||| ||||||||||||||||||||| Sbjct 555 GCCCAGTTGATGAAGTCGGCGACCACGAGGAAGTACCCCGGGAAGCCCATCTGGATGATG 496 Query 40728 ATGTCGATCTCGTACTGGAGCTGCTTGCCGTGCTCGTAGTCCG---TGCCGTTCGGGTAC 40784 | ||| |||||||||| |||||||| || | ||||| ||||||| |||||| Sbjct 495 ACCTCGGTCTCGTACTGCGCCTGCTTGC---GCGCCGCGTCCGGGATGCCGTTGGGGTAC 439 Query 40785 CGACGACGCGCGCCTCGGGCGACCTCGTCCTCGAACCAGGTGATCTCCGTGTGCCCCTCG 40844 || || || || || | ||||| | |||||||| | |||| | |||||| Sbjct 438 CGGCGGTGCAGCCCGCGCTCCACCTCCTTGACGAACCAGCTCGTCTCGTCCTCGCCCTCG 379 Query 40845 GGCACCGGGAACTTCGGCAT 40864 || || |||||| |||||| Sbjct 378 GGGACGGGGAACCGCGGCAT 359 >seq9295 Length=372 Score = 98.7 bits (108), Expect = 3e-16 Identities = 199/290 (69%), Gaps = 9/290 (3%) Strand=Plus/Plus Query 40426 TCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGC 40485 |||||| ||||||| | | | |||| || || | ||||| |||||| ||||| Sbjct 58 TCGCGACCTGCGCGGCGTGCGTGCGCCCGAACGTCTCGTAGACGTGCTGGATGACCTCCT 117 Query 40486 CACGACGC-CGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTC 40544 | || ||| | | | |||| ||||||||||| || ||| | ||||||||||| Sbjct 118 CGCGCCGCGCCGAC-TCGATGTCGATGTCGATGTCCGGCGGGCCGTCGCGCTCGGGGGCG 176 Query 40545 AGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACG 40604 ||||| |||||||| | || ||||||| || || ||||| | | ||||| ||||| || Sbjct 177 AGGAAGCGCTCGAACAGCAGGCCGTGCTTCACCGCGTCGACGGCCGTGATGCCGAGCGCG 236 Query 40605 TAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCC 40664 ||| |||| || || || ||||| ||||| || ||| || |||| ||| Sbjct 237 TAGCAGACCGCGGAGTTCGCGGCCGAGCCGCGCCCCTGGGCGA---GGATCCCGT--TCC 291 Query 40665 TTCGCC--CAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAG 40712 | || | | || || ||| ||| |||||||||||| ||||||| Sbjct 292 TGCGGCAGAACTCGACGAGGTCGTAGACCACGAGGAAGTACCCCGGGAAG 341 >seq10901 Length=204 Score = 95.1 bits (104), Expect = 4e-15 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 40311 TTGCCCATCACGTCGGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGGAAGGGCTTG 40370 |||||||||||| | | ||| ||||||||| |||||||| || | | |||||| | Sbjct 20 TTGCCCATCACGGCCGGCGGCATCGCCTTGGTGAGCTTCTCCCCCATCGCGAAGGGGAAG 79 Query 40371 TCCAGCACGCGGGCTGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGTACGTCGCG 40430 | || | || || | |||||| | ||| | |||||||| ||||| || || Sbjct 80 CCGAGGAGCCGCGCCGAGTCCTTGAGCGCCTGCTTGGCCTTGATGGTGCCGTAGGTGACG 139 Query 40431 ATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGCCACGA 40490 ||||| ||||| |||| | ||||||||| ||||||||| |||| ||||| || || Sbjct 140 ATCTGGGCGACGCGGTCGTCGCCGTACTTCTCCGTGACGTACCGGATGACCTCCCCGCGC 199 Query 40491 CGCCG 40495 || || Sbjct 200 CGACG 204 >seq8563 Length=328 Score = 91.5 bits (100), Expect = 5e-14 Identities = 161/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 41256 GCCTCGTCGTACTGACCCAGGTTCAGCCTGGTCATGACTTCGCCACCAGGGCACCCCGTG 41315 |||||||| |||| || ||| ||| | ||| || ||||| |||||||| | Sbjct 3 GCCTCGTCCCACTGTCCGAGGCGCAGGCGCGTCTGGATCTCGCCCGACGGGCACCCGCTC 62 Query 41316 GTTCCGATGATGCCCTCGCTGCACTCGGCGACGAGTTCCTTGTCGAGGCGGGCGTACTTG 41375 || ||| || ||||| || | || || ||| || ||| | ||| | ||||| Sbjct 63 GTCGCGACGAGGCCCTTGCCGTACCGCTGGAGGAGGTCGCGGTCCATGCGCGGCCACTTG 122 Query 41376 CCCATCAGCCCCTCCTGGTAGGAGCGAGACGTGATGCGCATGAGGTTGTGAAGGCCCGTC 41435 |||||| ||||||| | | | | | |||| || | |||||||| || ||| Sbjct 123 CCCATCTGCCCCTCGAGCGACGCGAGCGACGACGCCCGGAACAGGTTGTGCAGACCCTCG 182 Query 41436 TTGTTCTGCGCGAGCATGGTCATGTGCGTGTACGCACCGTTACCCGACACGTCGT 41490 |||| || |||||||| ||||||||||||||||||||| |||| ||||||| Sbjct 183 TTGTCCTTCGCGAGCAGCGTCATGTGCGTGTACGCACCGCGCGCCGAGACGTCGT 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163862847631040