Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04- 27] 11,280 sequences; 13,094,546 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq10065 286 2e-72 seq10360 210 1e-49 seq1887 98.7 5e-16 >seq10065 Length=275 Score = 286 bits (316), Expect = 2e-72 Identities = 227/273 (83%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 59446 ACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGAG 59505 |||||||||||||| || || || ||| || ||||| ||||||||||||||||||||| Sbjct 275 ACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAG 216 Query 59506 GAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAAC 59565 || ||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 215 GAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCG 156 Query 59566 ATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGGAG 59625 |||||||||||||||||||| | |||||||||| ||||||||||||||||||||| Sbjct 155 ATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGAG 96 Query 59626 AATCCGAACCTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGACGATCCG 59685 || |||||||| || |||||||| |||||||| ||||||||||| |||| ||| ||| Sbjct 95 AACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGCCG 36 Query 59686 CTGAAGCGGAAGGTGGCCTCGACGTTGCTGGAG 59718 || ||||| ||||| || ||| |||| ||| Sbjct 35 CTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAG 3 >seq10360 Length=215 Score = 210 bits (232), Expect = 1e-49 Identities = 169/204 (83%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 59887 CGCGAGGAGCTGAAGGACTACACGTACGGTCTGCTACTCGAGTTGTACGACAACGAGATT 59946 ||||| ||||| |||| ||||||| || ||||| ||||| ||||||| |||||| | Sbjct 10 CGCGACGAGCTCAAGGCGTACACGTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAGGTG 69 Query 59947 GAGTACACGCAGGATCTGTACGACGGCGTGGGACTGACTGAGGATGTCAAGATGTTCCTG 60006 |||||||| |||| || ||||||||||| || ||||| ||||| ||||||| ||||||| Sbjct 70 CAGTACACGGAGGACCTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTG 129 Query 60007 CGCTACAACGCCAACAAGGCGCTGATGAATCTCGGCTACGAGGCGCTGTTCCCGCGCGAC 60066 || |||||||||||||||||||| ||||| ||||||||||||||||| ||||| ||| Sbjct 130 CGGTACAACGCCAACAAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTCCCCAAGGAC 189 Query 60067 GAAACCGAGGTGAATGCGGCGATC 60090 || ||||| || || |||||||| Sbjct 190 GAGACCGACGTCAACCCGGCGATC 213 >seq1887 Length=154 Score = 98.7 bits (108), Expect = 5e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 60051 GCTGTTCCCGCGCGACGAAACCGAGGTGAATGCGGCGATCTTGGCGGCACTGTCCCCTGG 60110 ||| ||||| ||||| ||||| || || |||||||| | |||| ||||| || Sbjct 1 GCTCTTCCCCAAGGACGAGACCGACGTCAACCCGGCGATCCTCTCGGCGCTGTCGCCGAA 60 Query 60111 CGGGGACGAGAACCACGACTTCTTCTCGGGCTCTGGCAGCACGTATGTGATTGGCAAGGC 60170 || ||||||||||||||||||||||| || || ||| |||| || || |||||||| Sbjct 61 CGCCGACGAGAACCACGACTTCTTCTCCGGGTCCGGCTCGTCGTACGTCATCGGCAAGGC 120 Query 60171 TGAGGTTACGGAAGACGAGGATTGGGACTTCT 60202 | | || || ||||| || |||||||||| Sbjct 121 CGTGAACACCGAGGACGACGACTGGGACTTCT 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258895603433280