Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04- 27] 11,280 sequences; 13,094,546 total letters Query= NC_021304.1 Length=51552 Score E Sequences producing significant alignments: (Bits) Value seq8943 322 2e-83 seq6176 269 9e-68 seq10370 187 8e-43 seq5848 127 7e-25 seq9295 98.7 3e-16 seq10901 95.1 4e-15 seq8563 95.1 4e-15 >seq8943 Length=399 Score = 322 bits (356), Expect = 2e-83 Identities = 310/398 (78%), Gaps = 0/398 (0%) Strand=Plus/Minus Query 39963 AGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGATCGGCGTGATCGCCTGCTGCCCG 40022 |||||||||| |||| || | | ||| |||||||| ||| |||| |||| ||||| Sbjct 398 AGGATCTCCGCGAGGGGCTGCTCGAGCTCCGGGTGGATGGGCTCGATCTTCTGCAGCCCG 339 Query 40023 TTCTTCCGGAGGGCGTAGTTCGTGTGAGACCCCACGCCCATCGGACCAGGACGGTACAGC 40082 ||||| || || |||||||||||||| || || ||||||||| || || ||||||||| Sbjct 338 TTCTTGCGCAGCGCGTAGTTCGTGTGCGAGTTCATGCCCATCGGGCCCGGGCGGTACAGC 279 Query 40083 GCGACGACGGCCGAGATGTCCTCGAAGTTGTCCGGCTTCAGCAGACGGAGCAGTGAGCGC 40142 |||| ||||||||||| ||| ||||| ||||||||||||| | | || || || | |||| Sbjct 278 GCGATGACGGCCGAGAGGTCGTCGAACTTGTCCGGCTTCATCTGGCGCAGGAGCGCGCGC 219 Query 40143 ATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGTCGCCCCTGGCCAGCAGCTCGTAC 40202 || | |||||||||||||||||| || ||||||||| || | || |||||||||||| Sbjct 218 ATGGGGCCGCCGTCGAGCTGGAACACGCCGAGCGTGTCACCGCGCGCGAGCAGCTCGTAC 159 Query 40203 GTCGCGGGGTCGTCCAGGGGGATGTTCTCCAGGTCGACGTGCTCCCCACGGTTGAGGCGG 40262 | ||| |||||| || | || ||| | |||| ||||| | ||| | | Sbjct 158 GACGCCTTGTCGTCGAGCGTGAGCGACTCGATCTCGATCGGCTCCTTGCCGTTCATCTCG 99 Query 40263 ATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCGAGGAAGTCCATCTTC 40322 |||||||||| ||||||| | | ||||||||||||||| |||||||||||||||||||| Sbjct 98 ATGTTCTCGAGCGCGTCGTCGAGGATCGTGAGGTTCCGCAGCCCGAGGAAGTCCATCTTG 39 Query 40323 AGCAGGCCCAGAGCCTCGCAGCTCGGGTAGTCGAACTG 40360 | ||||| || ||||| | |||||||||||||||| Sbjct 38 ATGAGGCCGAGGCCCTCGGACGTCGGGTAGTCGAACTG 1 >seq6176 Length=304 Score = 269 bits (298), Expect = 9e-68 Identities = 241/302 (80%), Gaps = 0/302 (0%) Strand=Plus/Minus Query 39677 CGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCGTAGCC 39736 |||||| | |||||| | ||| |||||| | || |||||||||||||||||||||||||| Sbjct 304 CGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCGTAGCC 245 Query 39737 AGCGAACGGGACCAGCACGTCCCACACTGCCTGGATGGCACCGTCCGAGTAGCCTCGCTC 39796 ||||||||||||||| |||||| || |||||||| || |||| ||||| || ||||| Sbjct 244 CGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTCGGAGTACCCGCGCTC 185 Query 39797 GCGCGCTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCC 39856 || ||| |||||| ||||||||||||| | || | ||| |||||||||||| Sbjct 184 CCGGCAGCCCGCCTGGAACGGCACGAACTCCTTGTCGAGGATCTCCTTCTTCTTCTTGCC 125 Query 39857 CATCGCCCGGCGAAGCAGGTCGGCCTGACCGAGGGTGTACCCGGCCATGACCTGTGCAAC 39916 |||||| || || |||||||||||||| ||||| | ||||||||| | || ||| || | Sbjct 124 CATCGCGCGCCGCAGCAGGTCGGCCTGTCCGAGCGAGTACCCGGCGAGGATCTGCGCGGC 65 Query 39917 CTTCTGCACTTGCTCCTGGTAGATGATGAGCTGGAAGGTCGGGTCCAGGATCTCCGACAG 39976 | |||| || ||||||||||||| |||||| | ||||| ||| |||||||||| || Sbjct 64 CCTCTGGACCTGCTCCTGGTAGACGATGAGGCCGTAGGTCTCGTCGAGGATCTCCGCGAG 5 Query 39977 GG 39978 || Sbjct 4 GG 3 >seq10370 Length=172 Score = 187 bits (206), Expect = 8e-43 Identities = 139/163 (85%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 40740 CCGTACTTCCGGGTGACGTACTGGATCACCTCGCCACGACGCCGGTCATCGAAGTCGATG 40799 ||||||||| ||||||||| |||| ||||| || || || || || |||||||||| | Sbjct 2 CCGTACTTCTCCGTGACGTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAAGTCGACG 61 Query 40800 TCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGC 40859 ||||| |||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||| Sbjct 62 TCGACGTCGGGCATCGACACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAGCCCGTGC 121 Query 40860 TCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCA 40902 |||||||||||||| |||||||| || | || ||||| | ||| Sbjct 122 TCCAGCGGGTCGAGCTCGGTGATGCCCATGAGGTAGGAGGCCA 164 >seq5848 Length=556 Score = 127 bits (140), Expect = 7e-25 Identities = 149/200 (75%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 40956 GCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAGCCCATCTGGATGATC 41015 |||||| ||||||||| ||||| |||||||||||| ||||||||||||||||||||| Sbjct 555 GCCCAGTTGATGAAGTCGGCGACCACGAGGAAGTACCCCGGGAAGCCCATCTGGATGATG 496 Query 41016 ATGTCGATCTCGTACTGGAGCTGCTTGCCGTGCTCGTAGTCCG---TGCCGTTCGGGTAC 41072 | ||| |||||||||| |||||||| || | ||||| ||||||| |||||| Sbjct 495 ACCTCGGTCTCGTACTGCGCCTGCTTGC---GCGCCGCGTCCGGGATGCCGTTGGGGTAC 439 Query 41073 CGACGACGCGCGCCTCGGGCGACCTCGTCCTCGAACCAGGTGATCTCCGTGTGCCCCTCG 41132 || || || || || | ||||| | |||||||| | |||| | |||||| Sbjct 438 CGGCGGTGCAGCCCGCGCTCCACCTCCTTGACGAACCAGCTCGTCTCGTCCTCGCCCTCG 379 Query 41133 GGCACCGGGAACTTCGGCAT 41152 || || |||||| |||||| Sbjct 378 GGGACGGGGAACCGCGGCAT 359 >seq9295 Length=372 Score = 98.7 bits (108), Expect = 3e-16 Identities = 199/290 (69%), Gaps = 9/290 (3%) Strand=Plus/Plus Query 40714 TCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGC 40773 |||||| ||||||| | | | |||| || || | ||||| |||||| ||||| Sbjct 58 TCGCGACCTGCGCGGCGTGCGTGCGCCCGAACGTCTCGTAGACGTGCTGGATGACCTCCT 117 Query 40774 CACGACGC-CGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTC 40832 | || ||| | | | |||| ||||||||||| || ||| | ||||||||||| Sbjct 118 CGCGCCGCGCCGAC-TCGATGTCGATGTCGATGTCCGGCGGGCCGTCGCGCTCGGGGGCG 176 Query 40833 AGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACG 40892 ||||| |||||||| | || ||||||| || || ||||| | | ||||| ||||| || Sbjct 177 AGGAAGCGCTCGAACAGCAGGCCGTGCTTCACCGCGTCGACGGCCGTGATGCCGAGCGCG 236 Query 40893 TAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCAGACGCCGTTCTCC 40952 ||| |||| || || || ||||| ||||| || ||| || |||| ||| Sbjct 237 TAGCAGACCGCGGAGTTCGCGGCCGAGCCGCGCCCCTGGGCGA---GGATCCCGT--TCC 291 Query 40953 TTCGCC--CAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAAG 41000 | || | | || || ||| ||| |||||||||||| ||||||| Sbjct 292 TGCGGCAGAACTCGACGAGGTCGTAGACCACGAGGAAGTACCCCGGGAAG 341 >seq10901 Length=204 Score = 95.1 bits (104), Expect = 4e-15 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 40599 TTGCCCATCACGTCGGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGGAAGGGCTTG 40658 |||||||||||| | | ||| ||||||||| |||||||| || | | |||||| | Sbjct 20 TTGCCCATCACGGCCGGCGGCATCGCCTTGGTGAGCTTCTCCCCCATCGCGAAGGGGAAG 79 Query 40659 TCCAGCACGCGGGCTGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGTACGTCGCG 40718 | || | || || | |||||| | ||| | |||||||| ||||| || || Sbjct 80 CCGAGGAGCCGCGCCGAGTCCTTGAGCGCCTGCTTGGCCTTGATGGTGCCGTAGGTGACG 139 Query 40719 ATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATCACCTCGCCACGA 40778 ||||| ||||| |||| | ||||||||| ||||||||| |||| ||||| || || Sbjct 140 ATCTGGGCGACGCGGTCGTCGCCGTACTTCTCCGTGACGTACCGGATGACCTCCCCGCGC 199 Query 40779 CGCCG 40783 || || Sbjct 200 CGACG 204 >seq8563 Length=328 Score = 95.1 bits (104), Expect = 4e-15 Identities = 224/331 (68%), Gaps = 13/331 (4%) Strand=Plus/Plus Query 41544 GCCTCGTCGTACTGCCCGAGGTTCAGCCGGGTCATGATCGCACCGCCAGGACATCCGGTC 41603 |||||||| |||| |||||| ||| || ||| |||| | || || || ||| || Sbjct 3 GCCTCGTCCCACTGTCCGAGGCGCAGGCGCGTCTGGATCTCGCCCGACGGGCACCCGCTC 62 Query 41604 GTGACGACCAGGCCCTCGTTGTGCTCGGCGACCAGGTCGAAGTCCATGCGCGGGTACTTC 41663 || |||| ||||||| | || | || |||||| |||||||||||| |||| Sbjct 63 GTCGCGACGAGGCCCTTGCCGTACCGCTGGAGGAGGTCGCGGTCCATGCGCGGCCACTTG 122 Query 41664 CCGAGCAGGCCCTCCTGGTACGACCGCGAGC--TGA--GCTTCATGAGGTTGTGCAGGCC 41719 || | | | ||||| | ||| ||||||| || | | ||||||||||| || Sbjct 123 CCCATCTGCCCCTC---GAGCGA-CGCGAGCGACGACGCCCGGAACAGGTTGTGCAGACC 178 Query 41720 GGTCTTGTTCGTGGAGAGGATCGTGAGGTGCGTGTACGCACCCCGACCGCTCACGTCGTA 41779 |||| | | | ||| | ||| | ||||||||||||||| || | ||||||| Sbjct 179 CTCGTTGTCCTTCGCGAGCAGCGTCATGTGCGTGTACGCACCGCGCGCCGAGACGTCGTC 238 Query 41780 CCGCTTCTGGTCTTCCGTGCCC-CACTGGACTCGCTCCTGGTCGAAGCGG---GAGTCCG 41835 || ||| | | | ||||| || | || || ||||||||| ||| | | ||| Sbjct 239 GGACTCCTGCCCCTGC-TGCCCGAACCGCACGCGGGTCTGGTCGAACCGGCTCGTGCCCG 297 Query 41836 GGGCCATGTACGCCTCGATGCCGATGATCGG 41866 | | | ||||||||||| |||||||||||| Sbjct 298 GCGTGACGTACGCCTCGACGCCGATGATCGG 328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164822719039040