Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04- 27] 11,280 sequences; 13,094,546 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq8943 316 7e-82 seq6176 251 2e-62 seq10370 187 8e-43 seq5848 122 3e-23 seq9295 111 5e-20 seq10901 109 2e-19 >seq8943 Length=399 Score = 316 bits (350), Expect = 7e-82 Identities = 309/398 (78%), Gaps = 0/398 (0%) Strand=Plus/Minus Query 39423 AGGATCTCCGACAGGGACTCGGCCACCTCGGGGTGGATCGGCGTGATCGCCTGCTGCCCG 39482 |||||||||| |||| || | | ||| |||||||| ||| |||| |||| ||||| Sbjct 398 AGGATCTCCGCGAGGGGCTGCTCGAGCTCCGGGTGGATGGGCTCGATCTTCTGCAGCCCG 339 Query 39483 TTCTTCCGGAGGGCGTAGTTCGTGTGAGACCCCACGCCCATCGGACCCGGACGGTACAGC 39542 ||||| || || |||||||||||||| || || ||||||||| ||||| ||||||||| Sbjct 338 TTCTTGCGCAGCGCGTAGTTCGTGTGCGAGTTCATGCCCATCGGGCCCGGGCGGTACAGC 279 Query 39543 GCGACGACGGCTGAGATGTCCTCGAAGTTGTCCGGCTTCAGCAGGCGGAGCAGTGAGCGC 39602 |||| |||||| |||| ||| ||||| ||||||||||||| | |||| || || | |||| Sbjct 278 GCGATGACGGCCGAGAGGTCGTCGAACTTGTCCGGCTTCATCTGGCGCAGGAGCGCGCGC 219 Query 39603 ATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGCGTGTCGCCCCTGGCCAGCAGCTCGTAG 39662 || | |||||||||||||||||| || ||||||||| || | || ||||||||||| Sbjct 218 ATGGGGCCGCCGTCGAGCTGGAACACGCCGAGCGTGTCACCGCGCGCGAGCAGCTCGTAC 159 Query 39663 GTCGGGGCGTCGTCCAGAGGGATGTTCTCCAGGTCGACGTGCTCCCCACGGTTGAGGCGG 39722 | || |||||| || | || ||| | |||| ||||| | ||| | | Sbjct 158 GACGCCTTGTCGTCGAGCGTGAGCGACTCGATCTCGATCGGCTCCTTGCCGTTCATCTCG 99 Query 39723 ATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCGAGGAAGTCCATCTTC 39782 |||||||||| ||||||| | | ||||||||||||||| |||||||||||||||||||| Sbjct 98 ATGTTCTCGAGCGCGTCGTCGAGGATCGTGAGGTTCCGCAGCCCGAGGAAGTCCATCTTG 39 Query 39783 AGCAGGCCCAGAGCCTCGCAGCTCGGGTAGTCGAACTG 39820 | ||||| || ||||| | |||||||||||||||| Sbjct 38 ATGAGGCCGAGGCCCTCGGACGTCGGGTAGTCGAACTG 1 >seq6176 Length=304 Score = 251 bits (278), Expect = 2e-62 Identities = 237/302 (78%), Gaps = 0/302 (0%) Strand=Plus/Minus Query 39137 CGCCGTGCGGTACGCGATGAGTCCGTACGCCGCCGAGTGCGCCTTGTTGAAGGCGTAGCC 39196 |||||| | |||||| | ||| |||||| | || |||||||||||||||||||||||||| Sbjct 304 CGCCGTCCAGTACGCCACGAGGCCGTACCCGGCGGAGTGCGCCTTGTTGAAGGCGTAGCC 245 Query 39197 AGCGAAGGGGACCAGCACGTCCCACACTGCCTGGATGGCACCGTCCGAGTAGCCTCGCTC 39256 ||||| ||||||||| |||||| || |||||||| || |||| ||||| || ||||| Sbjct 244 CGCGAACGGGACCAGCGTGTCCCAGACCGCCTGGATCGCGGCGTCGGAGTACCCGCGCTC 185 Query 39257 GCGCGCTCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCC 39316 || ||| |||||| ||||||||||||| | || | ||| |||||||||||| Sbjct 184 CCGGCAGCCCGCCTGGAACGGCACGAACTCCTTGTCGAGGATCTCCTTCTTCTTCTTGCC 125 Query 39317 CATCGCCCGGCGAAGCAGGTCGGCCTGACCCAGGGTGTACCCGGCCATGACCTGTGCAAC 39376 |||||| || || |||||||||||||| || || | ||||||||| | || ||| || | Sbjct 124 CATCGCGCGCCGCAGCAGGTCGGCCTGTCCGAGCGAGTACCCGGCGAGGATCTGCGCGGC 65 Query 39377 CTTCTGCACCTGCTCCTGGTAGATGATCAACTGGAATGTCGGGTCCAGGATCTCCGACAG 39436 | |||| |||||||||||||||| ||| | | | ||| ||| |||||||||| || Sbjct 64 CCTCTGGACCTGCTCCTGGTAGACGATGAGGCCGTAGGTCTCGTCGAGGATCTCCGCGAG 5 Query 39437 GG 39438 || Sbjct 4 GG 3 >seq10370 Length=172 Score = 187 bits (206), Expect = 8e-43 Identities = 139/163 (85%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 40200 CCGTACTTCCGGGTGACGTACTGGATGACCTCGCCACGACGCCGGTCATCGAAGTCGATG 40259 ||||||||| ||||||||| |||||||||| || || || || || |||||||||| | Sbjct 2 CCGTACTTCTCCGTGACGTACCGGATGACCTCCCCGCGCCGACGCTCGTCGAAGTCGACG 61 Query 40260 TCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATGAGCCCGTGC 40319 ||||| |||||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| Sbjct 62 TCGACGTCGGGCATCGACACACGCTCGGGGTTGAGGAACCGCTCGAAGATCAGCCCGTGC 121 Query 40320 TCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCA 40362 |||||||||||||| |||||||| || | || ||||| | ||| Sbjct 122 TCCAGCGGGTCGAGCTCGGTGATGCCCATGAGGTAGGAGGCCA 164 >seq5848 Length=556 Score = 122 bits (134), Expect = 3e-23 Identities = 150/202 (74%), Gaps = 10/202 (5%) Strand=Plus/Minus Query 40416 GCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGATGATC 40475 |||||| ||||||||| ||||| |||||||||||| |||||| |||||||||||||| Sbjct 555 GCCCAGTTGATGAAGTCGGCGACCACGAGGAAGTACCCCGGGAAGCCCATCTGGATGATG 496 Query 40476 ATGTCGATCTCGTACTGGAGCTGCTTGCCGTGCTCGTAGTCCG---TGCCGTTCGGGTAC 40532 | ||| |||||||||| |||||||| || | ||||| ||||||| |||||| Sbjct 495 ACCTCGGTCTCGTACTGCGCCTGCTTGC---GCGCCGCGTCCGGGATGCCGTTGGGGTAC 439 Query 40533 CGACGACGGGCA--CCTCGATGGACCTCGTCCTCGAACCAGGTGATCTCCGTGTGCCCCT 40590 || || | ||| || || | ||||| | |||||||| | |||| | |||| Sbjct 438 CGGCG--GTGCAGCCCGCGCTCCACCTCCTTGACGAACCAGCTCGTCTCGTCCTCGCCCT 381 Query 40591 CGGGCACCGGGAACTTCGGCAT 40612 |||| || |||||| |||||| Sbjct 380 CGGGGACGGGGAACCGCGGCAT 359 >seq9295 Length=372 Score = 111 bits (122), Expect = 5e-20 Identities = 201/289 (70%), Gaps = 9/289 (3%) Strand=Plus/Plus Query 40174 TCGCGATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATGACCTCGC 40233 |||||| ||||||| | | | |||| || || | ||||| |||||||||||| Sbjct 58 TCGCGACCTGCGCGGCGTGCGTGCGCCCGAACGTCTCGTAGACGTGCTGGATGACCTCCT 117 Query 40234 CACGACGC-CGGTCATCGAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTC 40292 | || ||| | | | |||| ||||||||||| || ||| | ||||||||||| Sbjct 118 CGCGCCGCGCCGAC-TCGATGTCGATGTCGATGTCCGGCGGGCCGTCGCGCTCGGGGGCG 176 Query 40293 AGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACG 40352 |||||||||||||| | || ||||||| || || ||||| | | ||||| ||||| || Sbjct 177 AGGAAGCGCTCGAACAGCAGGCCGTGCTTCACCGCGTCGACGGCCGTGATGCCGAGCGCG 236 Query 40353 TAGGCGACCAGCGAACCGGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCC 40412 ||| |||| || || || ||||| ||||| || ||| || ||||| ||| Sbjct 237 TAGCAGACCGCGGAGTTCGCGGCCGAGCCGCGCCCCTGGGCGA---GGATCCCGT--TCC 291 Query 40413 TTCGCC--CAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAA 40459 | || | | || || ||| ||| |||||||||||| |||||| Sbjct 292 TGCGGCAGAACTCGACGAGGTCGTAGACCACGAGGAAGTACCCCGGGAA 340 >seq10901 Length=204 Score = 109 bits (120), Expect = 2e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 40059 TTGCCCATCACGTCGGCCGGGTACGCCTTGGTCAGCTTCTCGCCGACCTGGAAGGGCTTG 40118 |||||||||||| | | ||| ||||||||| |||||||| || | | |||||| | Sbjct 20 TTGCCCATCACGGCCGGCGGCATCGCCTTGGTGAGCTTCTCCCCCATCGCGAAGGGGAAG 79 Query 40119 TCGAGCACGCGAGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGTCCGTACGTCGCG 40178 |||| | || |||| |||||| | ||| | |||||||| ||||| || || Sbjct 80 CCGAGGAGCCGCGCCGAGTCCTTGAGCGCCTGCTTGGCCTTGATGGTGCCGTAGGTGACG 139 Query 40179 ATCTGCGCGACCTTGTCGGCCCCGTACTTCCGGGTGACGTACTGGATGACCTCGCCACGA 40238 ||||| ||||| |||| | ||||||||| ||||||||| |||||||||| || || Sbjct 140 ATCTGGGCGACGCGGTCGTCGCCGTACTTCTCCGTGACGTACCGGATGACCTCCCCGCGC 199 Query 40239 CGCCG 40243 || || Sbjct 200 CGACG 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163302922643040