Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04- 27] 11,280 sequences; 13,094,546 total letters Query= NC_028986.1 Length=153401 Score E Sequences producing significant alignments: (Bits) Value seq10370 89.7 5e-13 seq9530 82.4 7e-11 >seq10370 Length=172 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/122 (77%), Gaps = 4/122 (3%) Strand=Plus/Minus Query 113724 GGCTCGCTGGTCACCTACGTCATGGGCATCACCTCGATCGACCCGATCAAGTACGACCTG 113783 ||||| ||| | ||||| |||||||||||||| | |||||||| | || ||| ||| Sbjct 171 GGCTCCATGGCCTCCTACCTCATGGGCATCACCGAGCTCGACCCGCTGGAGCACGGGCTG 112 Query 113784 ATGTTCGAGCGCTTCATCAACCCGGACC--GCCCCGACTTCCCCGACATCGACGTCGACT 113841 || |||||||| ||| ||||||| || | | ||| | |||||| |||||||||||| Sbjct 111 ATCTTCGAGCGGTTCCTCAACCCCGAGCGTGTGTCGA--TGCCCGACGTCGACGTCGACT 54 Query 113842 TC 113843 || Sbjct 53 TC 52 >seq9530 Length=172 Score = 82.4 bits (90), Expect = 7e-11 Identities = 67/80 (84%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 90640 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGTTGTCGCAGGTTCGAA 90699 |||||||| | ||| |||| || |||||| ||| ||||| ||| ||||||||||| || Sbjct 79 CGGGGTGTGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACGAAGAGGTCGCAGGTTCAAA 20 Query 90700 TCCTGTCACCCCGACTCAGC 90719 ||||||||||||||| |||| Sbjct 19 TCCTGTCACCCCGAC-CAGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 490686003516800