Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04- 27] 11,280 sequences; 13,094,546 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq10065 262 2e-65 seq10360 215 3e-51 seq8799 141 6e-29 seq1887 134 8e-27 >seq10065 Length=275 Score = 262 bits (290), Expect = 2e-65 Identities = 222/273 (81%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 78401 ACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACACCCCGCACGAG 78460 || ||||||||||| || ||||| | ||||||||| ||||||| | ||| ||||||||| Sbjct 275 ACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAG 216 Query 78461 GAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTCCTACAGCTCG 78520 || |||||| ||||||||||||||||||||||||||| ||||||||| |||| ||| Sbjct 215 GAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCG 156 Query 78521 ATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCGTTCCGTTGGTCGGAGGAG 78580 |||||||| ||||| |||||| | |||| ||||| |||||||| |||||||||||| Sbjct 155 ATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGAG 96 Query 78581 AACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTACTACCGCGGCGACGACCCC 78640 ||| | |||| |||||||||||| |||||||| ||||||||||| |||||| || Sbjct 95 AACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGCCG 36 Query 78641 TTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAG 78673 | ||||| ||||| || || ||||| || ||| Sbjct 35 CTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAG 3 >seq10360 Length=215 Score = 215 bits (238), Expect = 3e-51 Identities = 171/200 (86%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 78848 GAGCTCAAGGAGTACACGTTCGATCTGCTCTCGGAGCTCTACGACAACGAGTGTG-ACTA 78906 |||||||||| |||||||||||| ||||||| ||||| ||||| |||||| ||| | || Sbjct 16 GAGCTCAAGGCGTACACGTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAG-GTGCAGTA 74 Query 78907 CACCGAGCAGCTCTATGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTA 78966 ||| ||| | ||||| |||| |||||| || |||||||| ||||||||||||||||| || Sbjct 75 CACGGAGGACCTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGCGGTA 134 Query 78967 CAACGGCAACAAGGCGCTGATGAACCTCGGCTACGAAGCACTGTTCCCCAAGGAAGAGAC 79026 ||||| |||||||||||| ||||||||||||||||| || || ||||||||||| ||||| Sbjct 135 CAACGCCAACAAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTCCCCAAGGACGAGAC 194 Query 79027 C-ATGGCAGACCCGGCCATC 79045 | | | || ||||||| ||| Sbjct 195 CGACGTCA-ACCCGGCGATC 213 >seq8799 Length=799 Score = 141 bits (156), Expect = 6e-29 Identities = 119/146 (82%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 69624 ATGGCAAATGACACCGTCATCACCGTCATCGGTAACCTGACCGCCGACCCCGAACTCCGG 69683 |||||| ||||||||||||||| || ||||| ||||| || | ||||| || || || Sbjct 155 ATGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGT 96 Query 69684 TTCACGCCCTCCGGTGCCGCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTC 69743 ||||| ||||| ||||| ||||| || |||||||| || ||||| || |||||| |||| Sbjct 95 TTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTC 36 Query 69744 GACAAGCAGTCGAACGAGTGGAAGGA 69769 ||| |||||||||||||||||||| Sbjct 35 GACCGCCAGTCGAACGAGTGGAAGGA 10 >seq1887 Length=154 Score = 134 bits (148), Expect = 8e-27 Identities = 126/156 (81%), Gaps = 6/156 (4%) Strand=Plus/Plus Query 79007 CTGTTCCCCAAGGAAGAGACC-ATGGCAGACCCGGCCATCATGTCCGCGCTCTCACCAGG 79065 || ||||||||||| |||||| | | || ||||||| ||| | || ||||| || || Sbjct 2 CTCTTCCCCAAGGACGAGACCGACGTCA-ACCCGGCGATCCTCTCGGCGCTGTCGCCGAA 60 Query 79066 CGGCGACGAGAACCACGACTTCTTCTCCGGGTCGGGCTCGAGCTACGTCATCGGCAAAGC 79125 || |||||||||||||||||||||||||||||| |||||| |||||||||||||| || Sbjct 61 CGCCGACGAGAACCACGACTTCTTCTCCGGGTCCGGCTCGTCGTACGTCATCGGCAAGGC 120 Query 79126 --TGAAGCCACGGCAGATGAGGACTGGGACTTCTGA 79159 |||| ||| | || || ||||||||||||||| Sbjct 121 CGTGAA--CACCGAGGACGACGACTGGGACTTCTGA 154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299280450763040