Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177885.1_202017-04-
27] 11,280 sequences; 13,094,546 total letters
Query= NC_030917.1
Length=93577
Score E
Sequences producing significant alignments: (Bits) Value
seq10065 262 2e-65
seq10360 215 3e-51
seq8799 141 6e-29
seq1887 134 8e-27
>seq10065
Length=275
Score = 262 bits (290), Expect = 2e-65
Identities = 222/273 (81%), Gaps = 0/273 (0%)
Strand=Plus/Minus
Query 78401 ACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACACCCCGCACGAG 78460
|| ||||||||||| || ||||| | ||||||||| ||||||| | ||| |||||||||
Sbjct 275 ACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACGAG 216
Query 78461 GAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTCCTACAGCTCG 78520
|| |||||| ||||||||||||||||||||||||||| ||||||||| |||| |||
Sbjct 215 GAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGTCG 156
Query 78521 ATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCGTTCCGTTGGTCGGAGGAG 78580
|||||||| ||||| |||||| | |||| ||||| |||||||| ||||||||||||
Sbjct 155 ATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGGAG 96
Query 78581 AACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTACTACCGCGGCGACGACCCC 78640
||| | |||| |||||||||||| |||||||| ||||||||||| |||||| ||
Sbjct 95 AACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGCCG 36
Query 78641 TTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAG 78673
| ||||| ||||| || || ||||| || |||
Sbjct 35 CTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAG 3
>seq10360
Length=215
Score = 215 bits (238), Expect = 3e-51
Identities = 171/200 (86%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 78848 GAGCTCAAGGAGTACACGTTCGATCTGCTCTCGGAGCTCTACGACAACGAGTGTG-ACTA 78906
|||||||||| |||||||||||| ||||||| ||||| ||||| |||||| ||| | ||
Sbjct 16 GAGCTCAAGGCGTACACGTTCGAGCTGCTCTTCGAGCTGTACGAGAACGAG-GTGCAGTA 74
Query 78907 CACCGAGCAGCTCTATGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTA 78966
||| ||| | ||||| |||| |||||| || |||||||| ||||||||||||||||| ||
Sbjct 75 CACGGAGGACCTCTACGACGGCGTCGGGCTGACCGAGGACGTCAAGAAGTTCCTGCGGTA 134
Query 78967 CAACGGCAACAAGGCGCTGATGAACCTCGGCTACGAAGCACTGTTCCCCAAGGAAGAGAC 79026
||||| |||||||||||| ||||||||||||||||| || || ||||||||||| |||||
Sbjct 135 CAACGCCAACAAGGCGCTCATGAACCTCGGCTACGAGGCGCTCTTCCCCAAGGACGAGAC 194
Query 79027 C-ATGGCAGACCCGGCCATC 79045
| | | || ||||||| |||
Sbjct 195 CGACGTCA-ACCCGGCGATC 213
>seq8799
Length=799
Score = 141 bits (156), Expect = 6e-29
Identities = 119/146 (82%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 69624 ATGGCAAATGACACCGTCATCACCGTCATCGGTAACCTGACCGCCGACCCCGAACTCCGG 69683
|||||| ||||||||||||||| || ||||| ||||| || | ||||| || || ||
Sbjct 155 ATGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGT 96
Query 69684 TTCACGCCCTCCGGTGCCGCGGTCGCGAACTTCACCGTCGCGTCGACCCCGCGGTACTTC 69743
||||| ||||| ||||| ||||| || |||||||| || ||||| || |||||| ||||
Sbjct 95 TTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTC 36
Query 69744 GACAAGCAGTCGAACGAGTGGAAGGA 69769
||| ||||||||||||||||||||
Sbjct 35 GACCGCCAGTCGAACGAGTGGAAGGA 10
>seq1887
Length=154
Score = 134 bits (148), Expect = 8e-27
Identities = 126/156 (81%), Gaps = 6/156 (4%)
Strand=Plus/Plus
Query 79007 CTGTTCCCCAAGGAAGAGACC-ATGGCAGACCCGGCCATCATGTCCGCGCTCTCACCAGG 79065
|| ||||||||||| |||||| | | || ||||||| ||| | || ||||| || ||
Sbjct 2 CTCTTCCCCAAGGACGAGACCGACGTCA-ACCCGGCGATCCTCTCGGCGCTGTCGCCGAA 60
Query 79066 CGGCGACGAGAACCACGACTTCTTCTCCGGGTCGGGCTCGAGCTACGTCATCGGCAAAGC 79125
|| |||||||||||||||||||||||||||||| |||||| |||||||||||||| ||
Sbjct 61 CGCCGACGAGAACCACGACTTCTTCTCCGGGTCCGGCTCGTCGTACGTCATCGGCAAGGC 120
Query 79126 --TGAAGCCACGGCAGATGAGGACTGGGACTTCTGA 79159
|||| ||| | || || |||||||||||||||
Sbjct 121 CGTGAA--CACCGAGGACGACGACTGGGACTTCTGA 154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 299280450763040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |