Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177905.1_202017-04- 25] 4,892 sequences; 11,751,231 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq3449 394 2e-105 seq681 268 2e-67 seq1782 91.5 4e-14 >seq3449 Length=218 Score = 394 bits (436), Expect = 2e-105 Identities = 218/218 (100%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 9402 GTCGAGCACGCACTGACGCGAAAGCTGTTCGACGAGATCGGCATCGAGTTGTGCGAGCGC 9461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GTCGAGCACGCACTGACGCGAAAGCTGTTCGACGAGATCGGCATCGAGTTGTGCGAGCGC 60 Query 9462 GGGCTGATGATGAAGGAAGGCACGCTGGTGGATGCGACGATCTTCGAGGCTGCGCCGTCC 9521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GGGCTGATGATGAAGGAAGGCACGCTGGTGGATGCGACGATCTTCGAGGCTGCGCCGTCC 120 Query 9522 ACGAAGAACGCCGGGAAGAGCCGTGACCCGGAGATGCATCAGACGAAGAAGGGCAACGAC 9581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ACGAAGAACGCCGGGAAGAGCCGTGACCCGGAGATGCATCAGACGAAGAAGGGCAACGAC 180 Query 9582 TGGTATTTCGGCATGAAGGCCCATGTCGGCGTCGACGC 9619 |||||||||||||||||||||||||||||||||||||| Sbjct 181 TGGTATTTCGGCATGAAGGCCCATGTCGGCGTCGACGC 218 >seq681 Length=148 Score = 268 bits (296), Expect = 2e-67 Identities = 148/148 (100%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 9604 ATGTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACG 9663 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACG 60 Query 9664 AGCCGGACGTATCGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCG 9723 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AGCCGGACGTATCGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCG 120 Query 9724 ATGCGGGCTACACCGGCGTGGACAAGCG 9751 |||||||||||||||||||||||||||| Sbjct 121 ATGCGGGCTACACCGGCGTGGACAAGCG 148 >seq1782 Length=167 Score = 91.5 bits (100), Expect = 4e-14 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 8973 TAAGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCG 9027 || |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 55 TAGGGAAACACTGATAAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119026685040592