Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177905.1_202017-04- 25] 4,892 sequences; 11,751,231 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1801 109 5e-19 seq2578 107 2e-18 seq3182 102 7e-17 seq3454 87.8 1e-12 >seq1801 Length=12533 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || |||||||| || ||||| ||||||||||| || || |||||| | ||| || || Sbjct 8436 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8495 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || ||| | | | | || || ||||| ||||| ||||| | || || Sbjct 8496 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 8555 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 ||||||||| | || | ||| ||||| || |||| |||| ||||| || | || ||| Sbjct 8556 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 8615 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||| |||||||| | ||| |||| || ||| || |||| || Sbjct 8616 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 8665 >seq2578 Length=5884 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| ||||| ||||| |||||||| || | ||| || || | Sbjct 426 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 367 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | | || || ||| ||| ||||| ||||| | || |||||| Sbjct 366 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 307 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | || | ||| ||||| ||||| || || | ||||| || | ||||||||| Sbjct 306 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 247 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || || || || || || | ||| |||| || |||| || Sbjct 246 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 200 >seq3182 Length=352 Score = 102 bits (112), Expect = 7e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 ||||| ||||| | || |||||||||||| | |||| ||| ||||| || ||||| Sbjct 333 GACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTTTGCCGGTAAGCAACTGGAA 274 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 || | ||||| || | ||||| |||||||| ||||| ||||||||||| ||||||| Sbjct 273 GACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAGTCTACGTTGCATTTGGTGTTG 214 Query 110486 AGACTGCGAGGGGG 110499 ||| || |||| || Sbjct 213 AGATTGAGAGGTGG 200 >seq3454 Length=18733 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 110282 TTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTC 110341 |||||||| ||||| || || || ||||| || | ||| || || || || | Sbjct 11877 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 11936 Query 110342 GGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTT 110401 | | | || || ||||| ||||| ||||| | || || ||||||||| | Sbjct 11937 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 11996 Query 110402 ATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAA 110461 || | ||| ||||| || |||| || | ||||| || | || ||||||||||||||| Sbjct 11997 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 12056 Query 110462 GAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || |||||| | || || ||| || |||| || Sbjct 12057 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 12094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412816985867756